Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulon of Rex in Desulfovibrio magneticus RS-1

Properties
Regulator type: Transcription factor
TF locus tag: DMR_42180
Regulator family: Rex
Regulation mode: repressor
Biological process: Energy metabolism
Effector: NADH
Regulog: Rex - Desulfovibrionales
Statistics of regulated genes:
- Genes 32
- Operons 9
Visualization:
Allows to visualize regulon content in the context of metabolic pathways
Built upon 107 sites [see more]
Member of regulog collections
Regulated operons
Locus Tag Name Function
Position: -140
Score: 4.2
Sequence: TTTGACACATTTTTCACTTG
Locus tag: DMR_39470
Name: sat
Funciton: Sulfate adenylyltransferase, dissimilatory-type (EC 2.7.7.4)
DMR_39470
sat
Sulfate adenylyltransferase, dissimilatory-type (EC 2.7.7.4)
Position: -76
Score: 4.4
Sequence: CTTGTGAACTTGTGCACGAG
Locus tag: DMR_42140
Name: atpI1
Funciton: ATP synthase protein I
Locus tag: DMR_42150
Name: atpI2
Funciton: ATP synthase protein I2
Locus tag: DMR_42160
Name: atpB
Funciton: ATP synthase A chain (EC 3.6.3.14)
Locus tag: DMR_42170
Name: atpE
Funciton: ATP synthase C chain (EC 3.6.3.14)
Locus tag: DMR_42180
Name: rex
Funciton: Redox-sensing transcriptional repressor Rex
DMR_42140
atpI1
ATP synthase protein I
DMR_42150
atpI2
ATP synthase protein I2
DMR_42160
atpB
ATP synthase A chain (EC 3.6.3.14)
DMR_42170
atpE
ATP synthase C chain (EC 3.6.3.14)
DMR_42180
rex
Redox-sensing transcriptional repressor Rex
Position: -217
Score: 5
Sequence: TTCGTGAATTTTTTCATTAG
Locus tag: DMR_18010
Name: qrcA
Funciton: cytochrome c class III family protein
Locus tag: DMR_18020
Name: qrcB
Funciton: molybdopterin oxidoreductase, molybdopterin-binding subunit, putative
Locus tag: DMR_18030
Name: qrcC
Funciton: molybdopterin oxidoreductase, iron-sulfur cluster-binding subunit, putative
Locus tag: DMR_18040
Name: qrcD
Funciton: molybdopterin oxidoreductase, transmembrane subunit, putative
DMR_18010
qrcA
cytochrome c class III family protein
DMR_18020
qrcB
molybdopterin oxidoreductase, molybdopterin-binding subunit, putative
DMR_18030
qrcC
molybdopterin oxidoreductase, iron-sulfur cluster-binding subunit, putative
DMR_18040
qrcD
molybdopterin oxidoreductase, transmembrane subunit, putative
Position: -32
Score: 4.3
Sequence: ATTGTGAAAAATCAAACATG
Locus tag: DMR_16390
Name: adk
Funciton: Adenylate kinase (EC 2.7.4.3)
DMR_16390
adk
Adenylate kinase (EC 2.7.4.3)
Position: -79
Score: 5.3
Sequence: ATTGGGATATTATTCACAAG
Locus tag: DMR_25800
Name: ppaC
Funciton: Manganese-dependent inorganic pyrophosphatase
DMR_25800
ppaC
Manganese-dependent inorganic pyrophosphatase
Position: -133
Score: 5.7
Sequence: TTTGTGAAAATAATCACAAA
Locus tag: DMR_02450
Name: hycA
Funciton: NADP-reducing Fe-hydrogenase, subunit A
Locus tag: DMR_02460
Name: hycB
Funciton: NADP-reducing hydrogenase, subunit B
Locus tag: DMR_02470
Name: hycC
Funciton: NADP-reducing Fe-hydrogenase, subunit C
Locus tag: DMR_02480
Name: hycD
Funciton: NADP-reducing Fe-hydrogenase, subunit D
DMR_02450
hycA
NADP-reducing Fe-hydrogenase, subunit A
DMR_02460
hycB
NADP-reducing hydrogenase, subunit B
DMR_02470
hycC
NADP-reducing Fe-hydrogenase, subunit C
DMR_02480
hycD
NADP-reducing Fe-hydrogenase, subunit D
Position: -279
Score: 4.4
Sequence: CTTGTTAAACCGATCACAAG
Locus tag: DMR_05390
Name: apsB
Funciton: Adenylylsulfate reductase beta-subunit (EC 1.8.99.2)
Locus tag: DMR_05400
Name: apsA
Funciton: Adenylylsulfate reductase alpha-subunit (EC 1.8.99.2)
Locus tag: DMR_05410
Name: qmoA
Funciton: quinone-interacting membrane-bound oxidoreductase complex subunit A
Locus tag: DMR_05420
Name: qmoB
Funciton: quinone-interacting membrane-bound oxidoreductase complex subunit B
Locus tag: DMR_05430
Name: qmoC
Funciton: quinone-interacting membrane-bound oxidoreductase complex subunit C
Locus tag: DMR_05440
Name: null
Funciton: hypothetical protein
DMR_05390
apsB
Adenylylsulfate reductase beta-subunit (EC 1.8.99.2)
DMR_05400
apsA
Adenylylsulfate reductase alpha-subunit (EC 1.8.99.2)
DMR_05410
qmoA
quinone-interacting membrane-bound oxidoreductase complex subunit A
DMR_05420
qmoB
quinone-interacting membrane-bound oxidoreductase complex subunit B
DMR_05430
qmoC
quinone-interacting membrane-bound oxidoreductase complex subunit C
DMR_05440
hypothetical protein
Position: -166
Score: 4.1
Sequence: ATTGTTCAAAACTTCACGTT
Locus tag: DMR_03600
Name: dsrA
Funciton: Sulfite reductase alpha subunit (EC 1.8.99.1)
Locus tag: DMR_03610
Name: dsrB
Funciton: Sulfite reductase beta subunit (EC 1.8.99.1)
Locus tag: DMR_03620
Name: dsrD
Funciton: Dissimilatory sulfite reductase D
DMR_03600
dsrA
Sulfite reductase alpha subunit (EC 1.8.99.1)
DMR_03610
dsrB
Sulfite reductase beta subunit (EC 1.8.99.1)
DMR_03620
dsrD
Dissimilatory sulfite reductase D
Position: -163
Score: 4.6
Sequence: TTCGGTCAATTCTTCACAAA
Position: -36
Score: 5.1
Sequence: TTTGCAAAAATTTTCACAAC
Locus tag: DMR_04760
Name: atpF1
Funciton: ATP synthase B' chain (EC 3.6.3.14)
Locus tag: DMR_04770
Name: atpF2
Funciton: ATP synthase F0, B subunit
Locus tag: DMR_04780
Name: atpH
Funciton: ATP synthase delta chain (EC 3.6.3.14)
Locus tag: DMR_04790
Name: atpA
Funciton: ATP synthase alpha chain (EC 3.6.3.14)
Locus tag: DMR_04800
Name: atpG
Funciton: ATP synthase gamma chain (EC 3.6.3.14)
Locus tag: DMR_04810
Name: atpD
Funciton: ATP synthase beta chain (EC 3.6.3.14)
Locus tag: DMR_04820
Name: atpC
Funciton: ATP synthase epsilon chain (EC 3.6.3.14)
DMR_04760
atpF1
ATP synthase B' chain (EC 3.6.3.14)
DMR_04770
atpF2
ATP synthase F0, B subunit
DMR_04780
atpH
ATP synthase delta chain (EC 3.6.3.14)
DMR_04790
atpA
ATP synthase alpha chain (EC 3.6.3.14)
DMR_04800
atpG
ATP synthase gamma chain (EC 3.6.3.14)
DMR_04810
atpD
ATP synthase beta chain (EC 3.6.3.14)
DMR_04820
atpC
ATP synthase epsilon chain (EC 3.6.3.14)
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