Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulon of Rex in Desulfovibrio desulfuricans G20

Properties
Regulator type: Transcription factor
TF locus tag: Dde_2702
Regulator family: Rex
Regulation mode: repressor
Biological process: Energy metabolism
Effector: NADH
Regulog: Rex - Desulfovibrionales
Statistics of regulated genes:
- Genes 52
- Operons 18
Visualization:
Allows to visualize regulon content in the context of metabolic pathways
Built upon 107 sites [see more]
Member of regulog collections
Regulated operons
Locus Tag Name Function
Position: -121
Score: 5
Sequence: TTCAGGAAATTTTTCACAAG
Position: -38
Score: 4.9
Sequence: TTTGAGCTTAAATTCACAAC
Locus tag: Dde_0990
Name: atpF1
Funciton: ATP synthase B' chain (EC 3.6.3.14)
Locus tag: Dde_0989
Name: atpF2
Funciton: ATP synthase F0, B subunit
Locus tag: Dde_0988
Name: atpH
Funciton: ATP synthase delta chain (EC 3.6.3.14)
Locus tag: Dde_0987
Name: atpA
Funciton: ATP synthase alpha chain (EC 3.6.3.14)
Locus tag: Dde_0986
Name: atpG
Funciton: ATP synthase gamma chain (EC 3.6.3.14)
Locus tag: Dde_0985
Name: atpD
Funciton: ATP synthase beta chain (EC 3.6.3.14)
Locus tag: Dde_0984
Name: atpC
Funciton: ATP synthase epsilon chain (EC 3.6.3.14)
Dde_0990
atpF1
ATP synthase B' chain (EC 3.6.3.14)
Dde_0989
atpF2
ATP synthase F0, B subunit
Dde_0988
atpH
ATP synthase delta chain (EC 3.6.3.14)
Dde_0987
atpA
ATP synthase alpha chain (EC 3.6.3.14)
Dde_0986
atpG
ATP synthase gamma chain (EC 3.6.3.14)
Dde_0985
atpD
ATP synthase beta chain (EC 3.6.3.14)
Dde_0984
atpC
ATP synthase epsilon chain (EC 3.6.3.14)
Position: -153
Score: 4.2
Sequence: TTTGTCCAAAAAATCACGTA
Locus tag: Dde_0526
Name: dsrA
Funciton: Sulfite reductase alpha subunit (EC 1.8.99.1)
Locus tag: Dde_0527
Name: dsrB
Funciton: Sulfite reductase beta subunit (EC 1.8.99.1)
Locus tag: Dde_0528
Name: dsrD
Funciton: Dissimilatory sulfite reductase D
Dde_0526
dsrA
Sulfite reductase alpha subunit (EC 1.8.99.1)
Dde_0527
dsrB
Sulfite reductase beta subunit (EC 1.8.99.1)
Dde_0528
dsrD
Dissimilatory sulfite reductase D
Position: -110
Score: 5
Sequence: TTCGTGAATTTTTTCACCTT
Locus tag: Dde_2932
Name: qrcA
Funciton: cytochrome c class III family protein
Locus tag: Dde_2933
Name: qrcB
Funciton: molybdopterin oxidoreductase, molybdopterin-binding subunit, putative
Locus tag: Dde_2934
Name: qrcC
Funciton: molybdopterin oxidoreductase, iron-sulfur cluster-binding subunit, putative
Locus tag: Dde_2935
Name: qrcD
Funciton: molybdopterin oxidoreductase, transmembrane subunit, putative
Dde_2932
qrcA
cytochrome c class III family protein
Dde_2933
qrcB
molybdopterin oxidoreductase, molybdopterin-binding subunit, putative
Dde_2934
qrcC
molybdopterin oxidoreductase, iron-sulfur cluster-binding subunit, putative
Dde_2935
qrcD
molybdopterin oxidoreductase, transmembrane subunit, putative
Position: -78
Score: 5.2
Sequence: ATTGTGCTATTTGGCACAAA
Locus tag: Dde_1778
Name: ppaC
Funciton: Manganese-dependent inorganic pyrophosphatase (EC 3.6.1.1)
Dde_1778
ppaC
Manganese-dependent inorganic pyrophosphatase (EC 3.6.1.1)
Position: -48
Score: 4.2
Sequence: TTTGTAAAACTGTGCACAGG
Locus tag: Dde_2134
Name: hysB
Funciton: periplasmic [NiFeSe] hydrogenase, small subunit
Locus tag: Dde_2135
Name: hysA
Funciton: periplasmic [NiFeSe] hydrogenase, large subunit, selenocysteine-containing
Dde_2134
hysB
periplasmic [NiFeSe] hydrogenase, small subunit
Dde_2135
hysA
periplasmic [NiFeSe] hydrogenase, large subunit, selenocysteine-containing
Position: -149
Score: 5.5
Sequence: TTTGCTAAAAATTTCACAAG
Locus tag: Dde_2265
Name: sat
Funciton: Sulfate adenylyltransferase, dissimilatory-type (EC 2.7.7.4)
Dde_2265
sat
Sulfate adenylyltransferase, dissimilatory-type (EC 2.7.7.4)
Position: -106
Score: 4.8
Sequence: CTTGAGAAAAAAATCTCAAA
Locus tag: Dde_2058
Name: hupB
Funciton: DNA-binding protein HU-beta (hupB)
Dde_2058
hupB
DNA-binding protein HU-beta (hupB)
Position: -83
Score: 4.9
Sequence: ATTGTGCATTATTTAACTAG
Locus tag: Dde_1591
Name: null
Funciton: metal dependent phosphohydrolase
Locus tag: Dde_1590
Name: null
Funciton: Glycosyl transferase, family 2
Dde_1591
metal dependent phosphohydrolase
Dde_1590
Glycosyl transferase, family 2
Position: -107
Score: 4.5
Sequence: CATGTGAAATTTTTCCCGAA
Locus tag: Dde_1140
Name: null
Funciton: MgtC/SapB transporter
Dde_1140
MgtC/SapB transporter
Position: -33
Score: 5.3
Sequence: CTTGGGAAATTTTGCACAAC
Locus tag: Dde_0552
Name: null
Funciton: hypothetical protein
Dde_0552
hypothetical protein
Position: -188
Score: 5.6
Sequence: TTTGTTAAATATCTCACAAG
Locus tag: Dde_1109
Name: apsB
Funciton: Adenylylsulfate reductase beta-subunit (EC 1.8.99.2)
Locus tag: Dde_1110
Name: apsA
Funciton: Adenylylsulfate reductase alpha-subunit (EC 1.8.99.2)
Locus tag: Dde_1111
Name: qmoA
Funciton: quinone-interacting membrane-bound oxidoreductase complex subunit A
Locus tag: Dde_1112
Name: qmoB
Funciton: quinone-interacting membrane-bound oxidoreductase complex subunit B
Locus tag: Dde_1113
Name: qmoC
Funciton: quinone-interacting membrane-bound oxidoreductase complex subunit C
Locus tag: Dde_1114
Name: null
Funciton: hypothetical protein
Dde_1109
apsB
Adenylylsulfate reductase beta-subunit (EC 1.8.99.2)
Dde_1110
apsA
Adenylylsulfate reductase alpha-subunit (EC 1.8.99.2)
Dde_1111
qmoA
quinone-interacting membrane-bound oxidoreductase complex subunit A
Dde_1112
qmoB
quinone-interacting membrane-bound oxidoreductase complex subunit B
Dde_1113
qmoC
quinone-interacting membrane-bound oxidoreductase complex subunit C
Dde_1114
hypothetical protein
Position: -114
Score: 5.2
Sequence: ATTGTGCTTTTTTGCACAAT
Locus tag: Dde_1076
Name: phsA
Funciton: thiosulfate reductase, putative
Locus tag: Dde_1075
Name: phsB
Funciton: thiosulfate reductase, iron-sulfur binding subunit
Dde_1076
phsA
thiosulfate reductase, putative
Dde_1075
phsB
thiosulfate reductase, iron-sulfur binding subunit
Position: -226
Score: 4.4
Sequence: TATGTGAAAAATTTAATTAG
Locus tag: Dde_0580
Name: dhcA
Funciton: Decaheme cytochrome c associated with Rnf complex
Locus tag: Dde_0581
Name: rnfC
Funciton: Electron transport complex protein RnfC
Locus tag: Dde_0582
Name: rnfD
Funciton: Electron transport complex protein RnfD
Locus tag: Dde_0583
Name: rnfG
Funciton: Electron transport complex protein RnfG
Locus tag: Dde_0584
Name: rnfE
Funciton: Electron transport complex protein RnfE
Locus tag: Dde_0585
Name: rnfA
Funciton: Electron transport complex protein RnfA
Locus tag: Dde_0586
Name: rnfB
Funciton: Electron transport complex protein RnfB
Locus tag: Dde_0587
Name: null
Funciton: ApbE family lipoprotein
Dde_0580
dhcA
Decaheme cytochrome c associated with Rnf complex
Dde_0581
rnfC
Electron transport complex protein RnfC
Dde_0582
rnfD
Electron transport complex protein RnfD
Dde_0583
rnfG
Electron transport complex protein RnfG
Dde_0584
rnfE
Electron transport complex protein RnfE
Dde_0585
rnfA
Electron transport complex protein RnfA
Dde_0586
rnfB
Electron transport complex protein RnfB
Dde_0587
ApbE family lipoprotein
Position: -48
Score: 5
Sequence: CTCGTTATTTATTTCACATT
Locus tag: Dde_2702
Name: rex
Funciton: Redox-sensing transcriptional repressor Rex
Dde_2702
rex
Redox-sensing transcriptional repressor Rex
Position: -151
Score: 4.8
Sequence: CTTGTGAAAAATTTCTAAAA
Position: -68
Score: 4.1
Sequence: CTTGTGAAGGAATGCACGAA
Locus tag: Dde_2698
Name: atpI1
Funciton: ATP synthase protein I
Locus tag: Dde_2699
Name: atpI2
Funciton: ATP synthase protein I2
Locus tag: Dde_2700
Name: atpB
Funciton: ATP synthase A chain (EC 3.6.3.14)
Locus tag: Dde_2701
Name: atpE
Funciton: ATP synthase C chain (EC 3.6.3.14)
Dde_2698
atpI1
ATP synthase protein I
Dde_2699
atpI2
ATP synthase protein I2
Dde_2700
atpB
ATP synthase A chain (EC 3.6.3.14)
Dde_2701
atpE
ATP synthase C chain (EC 3.6.3.14)
Position: -12
Score: 5.1
Sequence: TTCGTGAAATAAATGACAAG
Locus tag: Dde_2028
Name: adk
Funciton: Adenylate kinase (EC 2.7.4.3)
Dde_2028
adk
Adenylate kinase (EC 2.7.4.3)
Position: -145
Score: 4.7
Sequence: TACGTTAAAAAAATCACAAT
Locus tag: Dde_2506
Name: null
Funciton: Sulfate transporter family protein
Dde_2506
Sulfate transporter family protein
Position: -167
Score: 4
Sequence: TATGTGAAAAAAATAATTAT
Locus tag: Dde_2270
Name: null
Funciton: hypothetical protein
Locus tag: Dde_2271
Name: dsrM
Funciton: Sulfite reduction-associated complex DsrMKJOP protein DsrM (= HmeC)
Locus tag: Dde_2272
Name: dsrK
Funciton: Sulfite reduction-associated complex DsrMKJOP protein DsrK (=HmeD)
Locus tag: Dde_2273
Name: dsrJ
Funciton: Sulfite reduction-associated complex DsrMKJOP multiheme protein DsrJ (=HmeF)
Locus tag: Dde_2274
Name: dsrO
Funciton: Sulfite reduction-associated complex DsrMKJOP iron-sulfur protein DsrO (=HmeA)
Locus tag: Dde_2275
Name: dsrP
Funciton: Sulfite reduction-associated complex DsrMKJOP protein DsrP (= HmeB)
Dde_2270
hypothetical protein
Dde_2271
dsrM
Sulfite reduction-associated complex DsrMKJOP protein DsrM (= HmeC)
Dde_2272
dsrK
Sulfite reduction-associated complex DsrMKJOP protein DsrK (=HmeD)
Dde_2273
dsrJ
Sulfite reduction-associated complex DsrMKJOP multiheme protein DsrJ (=HmeF)
Dde_2274
dsrO
Sulfite reduction-associated complex DsrMKJOP iron-sulfur protein DsrO (=HmeA)
Dde_2275
dsrP
Sulfite reduction-associated complex DsrMKJOP protein DsrP (= HmeB)
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