Regulon of Rex in Desulfovibrio desulfuricans G20
| Regulator type: | Transcription factor |
| TF locus tag: | Dde_2702 |
| Regulator family: | Rex |
| Regulation mode: | repressor |
| Biological process: | Energy metabolism |
| Effector: | NADH |
| Regulog: | Rex - Desulfovibrionales |
| Statistics of regulated genes: | |
| - Genes | 52 |
| - Operons | 18 |
| Visualization: | |
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Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Desulfovibrionales
- By trascription factor - Rex
- By TF family - Rex
- By effector - NADH
- By pathway - Energy metabolism
| Locus Tag | Name | Function | |
|---|---|---|---|
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Position: -121
Score: 5 Sequence: TTCAGGAAATTTTTCACAAG
Position: -38
Score: 4.9 Sequence: TTTGAGCTTAAATTCACAAC
Locus tag: Dde_0990
Name: atpF1 Funciton: ATP synthase B' chain (EC 3.6.3.14)
Locus tag: Dde_0989
Name: atpF2 Funciton: ATP synthase F0, B subunit
Locus tag: Dde_0988
Name: atpH Funciton: ATP synthase delta chain (EC 3.6.3.14)
Locus tag: Dde_0987
Name: atpA Funciton: ATP synthase alpha chain (EC 3.6.3.14)
Locus tag: Dde_0986
Name: atpG Funciton: ATP synthase gamma chain (EC 3.6.3.14)
Locus tag: Dde_0985
Name: atpD Funciton: ATP synthase beta chain (EC 3.6.3.14)
Locus tag: Dde_0984
Name: atpC Funciton: ATP synthase epsilon chain (EC 3.6.3.14) |
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atpF1
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ATP synthase B' chain (EC 3.6.3.14)
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atpF2
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ATP synthase F0, B subunit
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atpH
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ATP synthase delta chain (EC 3.6.3.14)
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atpA
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ATP synthase alpha chain (EC 3.6.3.14)
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atpG
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ATP synthase gamma chain (EC 3.6.3.14)
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atpD
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ATP synthase beta chain (EC 3.6.3.14)
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atpC
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ATP synthase epsilon chain (EC 3.6.3.14)
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Position: -153
Score: 4.2 Sequence: TTTGTCCAAAAAATCACGTA
Locus tag: Dde_0526
Name: dsrA Funciton: Sulfite reductase alpha subunit (EC 1.8.99.1)
Locus tag: Dde_0527
Name: dsrB Funciton: Sulfite reductase beta subunit (EC 1.8.99.1)
Locus tag: Dde_0528
Name: dsrD Funciton: Dissimilatory sulfite reductase D |
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dsrA
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Sulfite reductase alpha subunit (EC 1.8.99.1)
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dsrB
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Sulfite reductase beta subunit (EC 1.8.99.1)
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dsrD
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Dissimilatory sulfite reductase D
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Position: -110
Score: 5 Sequence: TTCGTGAATTTTTTCACCTT
Locus tag: Dde_2932
Name: qrcA Funciton: cytochrome c class III family protein
Locus tag: Dde_2933
Name: qrcB Funciton: molybdopterin oxidoreductase, molybdopterin-binding subunit, putative
Locus tag: Dde_2934
Name: qrcC Funciton: molybdopterin oxidoreductase, iron-sulfur cluster-binding subunit, putative
Locus tag: Dde_2935
Name: qrcD Funciton: molybdopterin oxidoreductase, transmembrane subunit, putative |
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qrcA
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cytochrome c class III family protein
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qrcB
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molybdopterin oxidoreductase, molybdopterin-binding subunit, putative
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qrcC
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molybdopterin oxidoreductase, iron-sulfur cluster-binding subunit, putative
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qrcD
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molybdopterin oxidoreductase, transmembrane subunit, putative
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Position: -78
Score: 5.2 Sequence: ATTGTGCTATTTGGCACAAA
Locus tag: Dde_1778
Name: ppaC Funciton: Manganese-dependent inorganic pyrophosphatase (EC 3.6.1.1) |
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ppaC
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Manganese-dependent inorganic pyrophosphatase (EC 3.6.1.1)
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Position: -48
Score: 4.2 Sequence: TTTGTAAAACTGTGCACAGG
Locus tag: Dde_2134
Name: hysB Funciton: periplasmic [NiFeSe] hydrogenase, small subunit
Locus tag: Dde_2135
Name: hysA Funciton: periplasmic [NiFeSe] hydrogenase, large subunit, selenocysteine-containing |
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hysB
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periplasmic [NiFeSe] hydrogenase, small subunit
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hysA
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periplasmic [NiFeSe] hydrogenase, large subunit, selenocysteine-containing
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Position: -149
Score: 5.5 Sequence: TTTGCTAAAAATTTCACAAG
Locus tag: Dde_2265
Name: sat Funciton: Sulfate adenylyltransferase, dissimilatory-type (EC 2.7.7.4) |
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sat
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Sulfate adenylyltransferase, dissimilatory-type (EC 2.7.7.4)
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Position: -106
Score: 4.8 Sequence: CTTGAGAAAAAAATCTCAAA
Locus tag: Dde_2058
Name: hupB Funciton: DNA-binding protein HU-beta (hupB) |
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hupB
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DNA-binding protein HU-beta (hupB)
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Position: -83
Score: 4.9 Sequence: ATTGTGCATTATTTAACTAG
Locus tag: Dde_1591
Name: null Funciton: metal dependent phosphohydrolase
Locus tag: Dde_1590
Name: null Funciton: Glycosyl transferase, family 2 |
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metal dependent phosphohydrolase
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Glycosyl transferase, family 2
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Position: -107
Score: 4.5 Sequence: CATGTGAAATTTTTCCCGAA
Locus tag: Dde_1140
Name: null Funciton: MgtC/SapB transporter |
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MgtC/SapB transporter
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Position: -33
Score: 5.3 Sequence: CTTGGGAAATTTTGCACAAC
Locus tag: Dde_0552
Name: null Funciton: hypothetical protein |
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hypothetical protein
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Position: -188
Score: 5.6 Sequence: TTTGTTAAATATCTCACAAG
Locus tag: Dde_1109
Name: apsB Funciton: Adenylylsulfate reductase beta-subunit (EC 1.8.99.2)
Locus tag: Dde_1110
Name: apsA Funciton: Adenylylsulfate reductase alpha-subunit (EC 1.8.99.2)
Locus tag: Dde_1111
Name: qmoA Funciton: quinone-interacting membrane-bound oxidoreductase complex subunit A
Locus tag: Dde_1112
Name: qmoB Funciton: quinone-interacting membrane-bound oxidoreductase complex subunit B
Locus tag: Dde_1113
Name: qmoC Funciton: quinone-interacting membrane-bound oxidoreductase complex subunit C
Locus tag: Dde_1114
Name: null Funciton: hypothetical protein |
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apsB
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Adenylylsulfate reductase beta-subunit (EC 1.8.99.2)
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apsA
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Adenylylsulfate reductase alpha-subunit (EC 1.8.99.2)
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qmoA
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quinone-interacting membrane-bound oxidoreductase complex subunit A
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qmoB
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quinone-interacting membrane-bound oxidoreductase complex subunit B
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qmoC
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quinone-interacting membrane-bound oxidoreductase complex subunit C
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hypothetical protein
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Position: -114
Score: 5.2 Sequence: ATTGTGCTTTTTTGCACAAT
Locus tag: Dde_1076
Name: phsA Funciton: thiosulfate reductase, putative
Locus tag: Dde_1075
Name: phsB Funciton: thiosulfate reductase, iron-sulfur binding subunit |
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phsA
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thiosulfate reductase, putative
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phsB
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thiosulfate reductase, iron-sulfur binding subunit
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Position: -226
Score: 4.4 Sequence: TATGTGAAAAATTTAATTAG
Locus tag: Dde_0580
Name: dhcA Funciton: Decaheme cytochrome c associated with Rnf complex
Locus tag: Dde_0581
Name: rnfC Funciton: Electron transport complex protein RnfC
Locus tag: Dde_0582
Name: rnfD Funciton: Electron transport complex protein RnfD
Locus tag: Dde_0583
Name: rnfG Funciton: Electron transport complex protein RnfG
Locus tag: Dde_0584
Name: rnfE Funciton: Electron transport complex protein RnfE
Locus tag: Dde_0585
Name: rnfA Funciton: Electron transport complex protein RnfA
Locus tag: Dde_0586
Name: rnfB Funciton: Electron transport complex protein RnfB
Locus tag: Dde_0587
Name: null Funciton: ApbE family lipoprotein |
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dhcA
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Decaheme cytochrome c associated with Rnf complex
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rnfC
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Electron transport complex protein RnfC
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rnfD
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Electron transport complex protein RnfD
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rnfG
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Electron transport complex protein RnfG
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rnfE
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Electron transport complex protein RnfE
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rnfA
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Electron transport complex protein RnfA
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rnfB
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Electron transport complex protein RnfB
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ApbE family lipoprotein
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Position: -48
Score: 5 Sequence: CTCGTTATTTATTTCACATT
Locus tag: Dde_2702
Name: rex Funciton: Redox-sensing transcriptional repressor Rex |
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rex
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Redox-sensing transcriptional repressor Rex
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Position: -151
Score: 4.8 Sequence: CTTGTGAAAAATTTCTAAAA
Position: -68
Score: 4.1 Sequence: CTTGTGAAGGAATGCACGAA
Locus tag: Dde_2698
Name: atpI1 Funciton: ATP synthase protein I
Locus tag: Dde_2699
Name: atpI2 Funciton: ATP synthase protein I2
Locus tag: Dde_2700
Name: atpB Funciton: ATP synthase A chain (EC 3.6.3.14)
Locus tag: Dde_2701
Name: atpE Funciton: ATP synthase C chain (EC 3.6.3.14) |
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atpI1
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ATP synthase protein I
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atpI2
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ATP synthase protein I2
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atpB
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ATP synthase A chain (EC 3.6.3.14)
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atpE
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ATP synthase C chain (EC 3.6.3.14)
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Position: -12
Score: 5.1 Sequence: TTCGTGAAATAAATGACAAG
Locus tag: Dde_2028
Name: adk Funciton: Adenylate kinase (EC 2.7.4.3) |
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adk
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Adenylate kinase (EC 2.7.4.3)
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Position: -145
Score: 4.7 Sequence: TACGTTAAAAAAATCACAAT
Locus tag: Dde_2506
Name: null Funciton: Sulfate transporter family protein |
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Sulfate transporter family protein
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Position: -167
Score: 4 Sequence: TATGTGAAAAAAATAATTAT
Locus tag: Dde_2270
Name: null Funciton: hypothetical protein
Locus tag: Dde_2271
Name: dsrM Funciton: Sulfite reduction-associated complex DsrMKJOP protein DsrM (= HmeC)
Locus tag: Dde_2272
Name: dsrK Funciton: Sulfite reduction-associated complex DsrMKJOP protein DsrK (=HmeD)
Locus tag: Dde_2273
Name: dsrJ Funciton: Sulfite reduction-associated complex DsrMKJOP multiheme protein DsrJ (=HmeF)
Locus tag: Dde_2274
Name: dsrO Funciton: Sulfite reduction-associated complex DsrMKJOP iron-sulfur protein DsrO (=HmeA)
Locus tag: Dde_2275
Name: dsrP Funciton: Sulfite reduction-associated complex DsrMKJOP protein DsrP (= HmeB) |
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hypothetical protein
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dsrM
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Sulfite reduction-associated complex DsrMKJOP protein DsrM (= HmeC)
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dsrK
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Sulfite reduction-associated complex DsrMKJOP protein DsrK (=HmeD)
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dsrJ
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Sulfite reduction-associated complex DsrMKJOP multiheme protein DsrJ (=HmeF)
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dsrO
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Sulfite reduction-associated complex DsrMKJOP iron-sulfur protein DsrO (=HmeA)
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dsrP
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Sulfite reduction-associated complex DsrMKJOP protein DsrP (= HmeB)
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |