Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulon of LexA in Phenylobacterium zucineum HLK1

Properties
Regulator type: Transcription factor
TF locus tag: PHZ_c1762
Regulator family: LexA
Regulation mode: repressor
Biological process: SOS response
Effector: DNA damage
Regulog: LexA - Caulobacterales
Statistics of regulated genes:
- Genes 13
- Operons 10
Visualization:
Allows to visualize regulon content in the context of metabolic pathways
Built upon 47 sites [see more]
Member of regulog collections
Regulated operons
Locus Tag Name Function
Position: -32
Score: 1
Sequence: AAACGAACCGCGAAC
Locus tag: PHZ_c2761
Name: lhr
Funciton: ATP-dependent RNA helicase, DEAD/DEAH family
Locus tag: PHZ_c2762
Name: PF00149
Funciton: Conserved hypothetical protein
PHZ_c2761
lhr
ATP-dependent RNA helicase, DEAD/DEAH family
PHZ_c2762
PF00149
Conserved hypothetical protein
Position: -205
Score: 0.1
Sequence: GAACAAAAGGCGAAT
Position: -188
Score: 1
Sequence: GAACGAACAAGGAAC
Locus tag: PHZ_c1782
Name: dnaE
Funciton: DNA polymerase III alpha subunit (EC 2.7.7.7)
PHZ_c1782
dnaE
DNA polymerase III alpha subunit (EC 2.7.7.7)
Position: -34
Score: 0.7
Sequence: GAACGGAAGTGGAAC
Locus tag: PHZ_c3266
Name: imuA
Funciton: Predicted RecA/RadA recombinase
Locus tag: PHZ_c3267
Name: imuB
Funciton: DNA polymerase-like protein PA0670
Locus tag: PHZ_c3268
Name: dnaE2
Funciton: DNA polymerase III alpha subunit (EC 2.7.7.7)
PHZ_c3266
imuA
Predicted RecA/RadA recombinase
PHZ_c3267
imuB
DNA polymerase-like protein PA0670
PHZ_c3268
dnaE2
DNA polymerase III alpha subunit (EC 2.7.7.7)
Position: -80
Score: 5
Sequence: GTTCTATTTTCGTTC
Locus tag: PHZ_c3480
Name: PF01078
Funciton: ComM-related protein
PHZ_c3480
PF01078
ComM-related protein
Position: -41
Score: 5.1
Sequence: GTTCTCTCTTCGTTC
Locus tag: PHZ_c3424
Name: COG5529
Funciton: Conserved hypothetical protein
PHZ_c3424
COG5529
Conserved hypothetical protein
Position: -31
Score: 5.1
Sequence: GTTTGCGCTTTGTTC
Locus tag: PHZ_c1762
Name: lexA
Funciton: SOS-response repressor and protease LexA (EC 3.4.21.88)
PHZ_c1762
lexA
SOS-response repressor and protease LexA (EC 3.4.21.88)
Position: -114
Score: 5.1
Sequence: GTTCGCCTTGCGTTC
Locus tag: PHZ_c1946
Name: uvrA
Funciton: Excinuclease ABC subunit A
PHZ_c1946
uvrA
Excinuclease ABC subunit A
Position: -42
Score: 5.2
Sequence: GTTCCCCTTCCGTTC
Locus tag: PHZ_c2755
Name: yoaA
Funciton: DinG family ATP-dependent helicase YoaA
PHZ_c2755
yoaA
DinG family ATP-dependent helicase YoaA
Position: -26
Score: 0.8
Sequence: GAACGGAGGCGGAAC
Locus tag: PHZ_c0224
Name: PF06319
Funciton: Conserved hypothetical protein
PHZ_c0224
PF06319
Conserved hypothetical protein
Position: -86
Score: 1.1
Sequence: GAACAAAGGAGGTAC
Locus tag: PHZ_c0985
Name: recA
Funciton: Recombinase A
PHZ_c0985
recA
Recombinase A
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