Regulon of LexA in Caulobacter sp. K31
| Regulator type: | Transcription factor |
| TF locus tag: | Caul_2782 |
| Regulator family: | LexA |
| Regulation mode: | repressor |
| Biological process: | SOS response |
| Effector: | DNA damage |
| Regulog: | LexA - Caulobacterales |
| Statistics of regulated genes: | |
| - Genes | 13 |
| - Operons | 10 |
| Visualization: | |
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Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By trascription factor - LexA
- By taxonomy - Caulobacterales
- By TF family - LexA
- By effector - DNA damage
- By pathway - SOS response
| Locus Tag | Name | Function | |
|---|---|---|---|
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Position: -33
Score: -0 Sequence: AAACGGAACGGGAAC
Locus tag: Caul_1454
Name: lhr Funciton: ATP-dependent RNA helicase, DEAD/DEAH family
Locus tag: Caul_1453
Name: PF00149 Funciton: Conserved hypothetical protein |
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lhr
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ATP-dependent RNA helicase, DEAD/DEAH family
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PF00149
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Conserved hypothetical protein
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Position: -162
Score: -0 Sequence: GAACAAAAGTGGAAT
Position: -144
Score: -0.5 Sequence: GAACAAACAGGCAAC
Locus tag: Caul_2808
Name: dnaE Funciton: DNA polymerase III alpha subunit (EC 2.7.7.7) |
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dnaE
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DNA polymerase III alpha subunit (EC 2.7.7.7)
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Position: -79
Score: 5.4 Sequence: GTTCGTTTTTCGTTC
Locus tag: Caul_0179
Name: PF01078 Funciton: ComM-related protein |
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PF01078
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ComM-related protein
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Position: -53
Score: 4.6 Sequence: GTTCTATCTTCGTTC
Locus tag: Caul_5071
Name: COG5529 Funciton: Conserved hypothetical protein |
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COG5529
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Conserved hypothetical protein
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Position: -38
Score: 5.1 Sequence: GTTTGCGGTTTGTTC
Locus tag: Caul_2782
Name: lexA Funciton: SOS-response repressor and protease LexA (EC 3.4.21.88) |
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lexA
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SOS-response repressor and protease LexA (EC 3.4.21.88)
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Position: -96
Score: 5 Sequence: GTTCGCACCTTGTTC
Locus tag: Caul_3697
Name: uvrA Funciton: Excinuclease ABC subunit A |
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uvrA
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Excinuclease ABC subunit A
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Position: -111
Score: 0.5 Sequence: GAACATGGAACAAAC
Locus tag: Caul_1392
Name: recA Funciton: Recombinase A |
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recA
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Recombinase A
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Position: -31
Score: 5.2 Sequence: GTTCTCGTTACGTTC
Locus tag: Caul_1412
Name: nth Funciton: Endonuclease III (EC 4.2.99.18) |
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nth
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Endonuclease III (EC 4.2.99.18)
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Position: -26
Score: 1 Sequence: GAACAAAGCTGGAAC
Locus tag: Caul_4208
Name: PF06319 Funciton: Conserved hypothetical protein |
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PF06319
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Conserved hypothetical protein
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Position: -40
Score: 0.4 Sequence: GAACAAAAGTGGAAC
Locus tag: Caul_4463
Name: imuA Funciton: Predicted RecA/RadA recombinase
Locus tag: Caul_4462
Name: imuB Funciton: DNA polymerase-like protein PA0670
Locus tag: Caul_4461
Name: dnaE2 Funciton: DNA polymerase III alpha subunit (EC 2.7.7.7) |
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imuA
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Predicted RecA/RadA recombinase
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imuB
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DNA polymerase-like protein PA0670
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dnaE2
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DNA polymerase III alpha subunit (EC 2.7.7.7)
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |