Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulon of LexA in Caulobacter crescentus CB15

Properties
Regulator type: Transcription factor
TF locus tag: CC1902
Regulator family: LexA
Regulation mode: repressor
Biological process: SOS response
Effector: DNA damage
Regulog: LexA - Caulobacterales
Statistics of regulated genes:
- Genes 15
- Operons 12
Visualization:
Allows to visualize regulon content in the context of metabolic pathways
Built upon 47 sites [see more]
Member of regulog collections
Regulated operons
Locus Tag Name Function
Position: -32
Score: -0.9
Sequence: AAACAGAAAGGGAAC
Locus tag: CC2040
Name: lhr
Funciton: ATP-dependent RNA helicase, DEAD/DEAH family
Locus tag: CC2041
Name: PF00149
Funciton: Conserved hypothetical protein
CC2040
lhr
ATP-dependent RNA helicase, DEAD/DEAH family
CC2041
PF00149
Conserved hypothetical protein
Position: -173
Score: 0.1
Sequence: GAACAAAACCGGAAT
Position: -155
Score: -0.2
Sequence: GAACAAAACAAGAAA
Locus tag: CC1926
Name: dnaE
Funciton: DNA polymerase III alpha subunit (EC 2.7.7.7)
CC1926
dnaE
DNA polymerase III alpha subunit (EC 2.7.7.7)
Position: -78
Score: 5.4
Sequence: GTTCGTTTTTCGTTC
Locus tag: CC0140
Name: PF01078
Funciton: ComM-related protein
CC0140
PF01078
ComM-related protein
Position: -101
Score: 4.8
Sequence: GTTCCGCTTTCGTTC
Locus tag: CC3711
Name: COG5529
Funciton: Conserved hypothetical protein
CC3711
COG5529
Conserved hypothetical protein
Position: -2
Score: 5.1
Sequence: GTTTGCGGTTTGTTC
Locus tag: CC1902
Name: lexA
Funciton: SOS-response repressor and protease LexA (EC 3.4.21.88)
CC1902
lexA
SOS-response repressor and protease LexA (EC 3.4.21.88)
Position: -93
Score: 5.4
Sequence: GTTCGCATCTTGTTC
Locus tag: CC2590
Name: uvrA
Funciton: Excinuclease ABC subunit A
CC2590
uvrA
Excinuclease ABC subunit A
Position: -42
Score: 4.9
Sequence: GTTCCCATTCTGTTT
Locus tag: CC2038
Name: yoaA
Funciton: DinG family ATP-dependent helicase YoaA
CC2038
yoaA
DinG family ATP-dependent helicase YoaA
Position: -62
Score: 5.2
Sequence: GATCCCGTTTCGTTC
Locus tag: CC1983
Name: recN
Funciton: DNA repair protein RecN
CC1983
recN
DNA repair protein RecN
Position: -122
Score: 1.8
Sequence: GAACATCTTGCGAAC
Locus tag: CC1087
Name: recA
Funciton: Recombinase A
CC1087
recA
Recombinase A
Position: -32
Score: 5
Sequence: GTTCTTGTTATGTTC
Locus tag: CC2272
Name: nth
Funciton: Endonuclease III (EC 4.2.99.18)
CC2272
nth
Endonuclease III (EC 4.2.99.18)
Position: -81
Score: 0.4
Sequence: GAACAAAAGTGGAAC
Locus tag: CC3213
Name: imuA
Funciton: Predicted RecA/RadA recombinase
Locus tag: CC3212
Name: imuB
Funciton: DNA polymerase-like protein PA0670
Locus tag: CC3211
Name: dnaE2
Funciton: DNA polymerase III alpha subunit (EC 2.7.7.7)
CC3213
imuA
Predicted RecA/RadA recombinase
CC3212
imuB
DNA polymerase-like protein PA0670
CC3211
dnaE2
DNA polymerase III alpha subunit (EC 2.7.7.7)
Position: -28
Score: 1
Sequence: GAACAAAGCTGGAAC
Locus tag: CC3467
Name: PF06319
Funciton: Conserved hypothetical protein
CC3467
PF06319
Conserved hypothetical protein
Export
Regulated Genes [ Tab delimited format ] DOWNLOAD
Regulatory Sites [ FASTA format ] DOWNLOAD
© 2009-2020 RegPrecise