Regulon of LexA in Granulibacter bethesdensis CGDNIH1
| Regulator type: | Transcription factor |
| TF locus tag: | GbCGDNIH1_0816 |
| Regulator family: | LexA |
| Regulation mode: | repressor |
| Biological process: | SOS response |
| Effector: | DNA damage |
| Regulog: | LexA - Rhodospirillales |
| Statistics of regulated genes: | |
| - Genes | 5 |
| - Operons | 5 |
| Visualization: | |
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Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Rhodospirillales
- By trascription factor - LexA
- By TF family - LexA
- By effector - DNA damage
- By pathway - SOS response
| Locus Tag | Name | Function | |
|---|---|---|---|
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Position: -71
Score: 4.6 Sequence: GTTCATTCATTGTTC
Locus tag: GbCGDNIH1_1856
Name: PF04055 Funciton: Radical SAM domain protein |
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PF04055
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Radical SAM domain protein
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Position: -62
Score: 4.3 Sequence: GTTGCCCGTTTGTTC
Locus tag: GbCGDNIH1_0816
Name: lexA Funciton: SOS-response repressor and protease LexA (EC 3.4.21.88) |
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lexA
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SOS-response repressor and protease LexA (EC 3.4.21.88)
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Position: -108
Score: 2.5 Sequence: GAACATATTATGAAC
Locus tag: GbCGDNIH1_1384
Name: recA Funciton: Recombinase A |
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recA
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Recombinase A
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Position: 25
Score: 1.1 Sequence: GAACTTTTCCAGAAC
Locus tag: GbCGDNIH1_1221
Name: uvrA Funciton: Excinuclease ABC subunit A |
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uvrA
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Excinuclease ABC subunit A
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Position: -9
Score: 0.2 Sequence: AAACGGAACGTGAAC
Locus tag: GbCGDNIH1_0995
Name: parC Funciton: Topoisomerase IV subunit A (EC 5.99.1.-) |
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parC
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Topoisomerase IV subunit A (EC 5.99.1.-)
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |