Regulon of LexA in Magnetospirillum magnetotacticum MS-1
| Regulator type: | Transcription factor |
| TF locus tag: | Magn03009696, Magn03000374 |
| Regulator family: | LexA |
| Regulation mode: | repressor |
| Biological process: | SOS response |
| Effector: | DNA damage |
| Regulog: | LexA - Rhodospirillales |
| Statistics of regulated genes: | |
| - Genes | 6 |
| - Operons | 6 |
| Visualization: | |
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Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Rhodospirillales
- By trascription factor - LexA
- By TF family - LexA
- By effector - DNA damage
- By pathway - SOS response
| Locus Tag | Name | Function | |
|---|---|---|---|
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Position: -98
Score: 4.7 Sequence: GTTCTCCTCTCGTTC
Locus tag: Magn03011075
Name: recA Funciton: Recombinase A |
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recA
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Recombinase A
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Position: -26
Score: 5 Sequence: GTTCCCGTAATGTTC
Locus tag: Magn03010153
Name: rmuC Funciton: DNA recombination protein RmuC |
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rmuC
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DNA recombination protein RmuC
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Position: -54
Score: 3.9 Sequence: GTGCACCAATCGTTC
Locus tag: Magn03008981
Name: yoaA Funciton: DinG family ATP-dependent helicase |
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yoaA
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DinG family ATP-dependent helicase
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Position: -120
Score: -0.6 Sequence: AAACAAAACGGAATC
Position: -48
Score: 4.6 Sequence: GTTTGTTCTTTGTTC
Locus tag: Magn03009696
Name: lexA Funciton: SOS-response repressor and protease LexA (EC 3.4.21.88) |
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lexA
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SOS-response repressor and protease LexA (EC 3.4.21.88)
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Position: -95
Score: 2.3 Sequence: GAACATATGGTGATC
Locus tag: Magn03009220
Name: dinB Funciton: DNA polymerase IV (EC 2.7.7.7) |
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dinB
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DNA polymerase IV (EC 2.7.7.7)
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Position: -254
Score: 4.7 Sequence: GTTCTCAATCCGTTC
Locus tag: Magn03007150
Name: dnaB Funciton: Replicative DNA helicase (EC 3.6.1.-) |
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dnaB
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Replicative DNA helicase (EC 3.6.1.-)
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |