Regulon of LexA in Roseobacter sp. MED193

Properties
Regulator type:	Transcription factor
TF locus tag:	MED193_03687
Regulator family:	LexA
Regulation mode:	repressor
Biological process:	SOS response
Effector:	DNA damage
Regulog:	LexA - Rhodobacterales
Statistics of regulated genes:
- Genes	14
- Operons	9
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 128 sites [see more]

Member of regulog collections

By trascription factor - LexA
By taxonomy - Rhodobacterales
By TF family - LexA
By effector - DNA damage
By pathway - SOS response

Regulated operons
	Locus Tag	Name	Function
Position: -30 Score: 0.2 Sequence: GAACAAAGGCAGAAC Locus tag: MED193_12418 Name: umuD Funciton: DNA polymerase V, subunit UmuD Locus tag: MED193_12423 Name: umuC Funciton: DNA polymerase V, subunit UmuC
	MED193_12418	umuD	DNA polymerase V, subunit UmuD
	MED193_12423	umuC	DNA polymerase V, subunit UmuC
Position: -57 Score: 1.3 Sequence: GAACAGAATGCGAAC Locus tag: MED193_07538 Name: uvrD Funciton: ATP-dependent DNA helicase II
	MED193_07538	uvrD	ATP-dependent DNA helicase II
Position: -58 Score: -0.5 Sequence: ACACAAAACGGGAAC Position: -47 Score: 1.5 Sequence: GAACATGAATAGAAC Locus tag: MED193_03687 Name: lexA Funciton: SOS-response repressor and protease LexA (EC 3.4.21.88)
	MED193_03687	lexA	SOS-response repressor and protease LexA (EC 3.4.21.88)
Position: -64 Score: 5.3 Sequence: GTTCGCCTTTTGTGC Locus tag: MED193_09210 Name: ruvC Funciton: Crossover junction endodeoxyribonuclease RuvC (EC 3.1.22.4) Locus tag: MED193_09205 Name: ruvA Funciton: Holliday junction DNA helicase RuvA Locus tag: MED193_09200 Name: ruvA Funciton: Holliday junction DNA helicase RuvA Locus tag: MED193_09195 Name: ruvB Funciton: Holliday junction DNA helicase RuvB
	MED193_09210	ruvC	Crossover junction endodeoxyribonuclease RuvC (EC 3.1.22.4)
	MED193_09205	ruvA	Holliday junction DNA helicase RuvA
	MED193_09200	ruvA	Holliday junction DNA helicase RuvA
	MED193_09195	ruvB	Holliday junction DNA helicase RuvB
Position: -117 Score: 4.8 Sequence: GTTCTTCTAACGTTC Locus tag: MED193_03447 Name: uvrA Funciton: Excinuclease ABC subunit A
	MED193_03447	uvrA	Excinuclease ABC subunit A
Position: -39 Score: 5.2 Sequence: GTTCTTCATTTGTTC Locus tag: MED193_22781 Name: PF04055 Funciton: Radical SAM domain protein
	MED193_22781	PF04055	Radical SAM domain protein
Position: -93 Score: 4.8 Sequence: GTTCTCCTTTTGACC Locus tag: MED193_04366 Name: recA Funciton: Recombinase A
	MED193_04366	recA	Recombinase A
Position: -26 Score: 5.2 Sequence: GTTCTCTTATTGTTC Locus tag: MED193_08438 Name: PF06319 Funciton: Transcription elongation factor
	MED193_08438	PF06319	Transcription elongation factor
Position: -44 Score: 5.1 Sequence: GTTCACTTTATGTTC Locus tag: MED193_12443 Name: umuD Funciton: DNA polymerase V, subunit UmuD Locus tag: MED193_12438 Name: umuC Funciton: DNA polymerase V, subunit UmuC
	MED193_12443	umuD	DNA polymerase V, subunit UmuD
	MED193_12438	umuC	DNA polymerase V, subunit UmuC

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --

Regulon of LexA in Roseobacter sp. MED193

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --