Regulon of LexA in Silicibacter pomeroyi DSS-3
| Regulator type: | Transcription factor |
| TF locus tag: | SPO2154 |
| Regulator family: | LexA |
| Regulation mode: | repressor |
| Biological process: | SOS response |
| Effector: | DNA damage |
| Regulog: | LexA - Rhodobacterales |
| Statistics of regulated genes: | |
| - Genes | 8 |
| - Operons | 6 |
| Visualization: | |
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Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By trascription factor - LexA
- By taxonomy - Rhodobacterales
- By TF family - LexA
- By effector - DNA damage
- By pathway - SOS response
| Locus Tag | Name | Function | |
|---|---|---|---|
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Position: -113
Score: 1.1 Sequence: GAACAAGCCGTGAAC
Locus tag: SPO1174
Name: uvrD Funciton: ATP-dependent DNA helicase II |
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uvrD
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ATP-dependent DNA helicase II
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Position: -59
Score: -0.3 Sequence: ACACAAAACAAGAAC
Locus tag: SPO2154
Name: lexA Funciton: SOS-response repressor and protease LexA (EC 3.4.21.88) |
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lexA
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SOS-response repressor and protease LexA (EC 3.4.21.88)
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Position: -60
Score: 5.1 Sequence: GTTCCCCTTTCGTGC
Locus tag: SPO3117
Name: ruvC Funciton: Crossover junction endodeoxyribonuclease RuvC (EC 3.1.22.4)
Locus tag: SPO3116
Name: ruvA Funciton: Holliday junction DNA helicase RuvA
Locus tag: SPO3115
Name: ruvB Funciton: Holliday junction DNA helicase RuvB |
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ruvC
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Crossover junction endodeoxyribonuclease RuvC (EC 3.1.22.4)
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ruvA
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Holliday junction DNA helicase RuvA
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ruvB
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Holliday junction DNA helicase RuvB
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Position: -81
Score: 5.2 Sequence: GTTCTCTTTACGTTC
Locus tag: SPO2218
Name: uvrA Funciton: Excinuclease ABC subunit A |
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uvrA
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Excinuclease ABC subunit A
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Position: -109
Score: 5.1 Sequence: GTTCTCTTTTTGATC
Position: -87
Score: 1.2 Sequence: GAACAAGAGGTGAAC
Locus tag: SPO2034
Name: recA Funciton: Recombinase A |
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recA
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Recombinase A
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Position: -20
Score: 5 Sequence: GTTCACCTATTGTTC
Locus tag: SPO1766
Name: PF06319 Funciton: Transcription elongation factor |
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PF06319
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Transcription elongation factor
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |