Regulon of LexA in Silicibacter pomeroyi DSS-3

Properties
Regulator type:	Transcription factor
TF locus tag:	SPO2154
Regulator family:	LexA
Regulation mode:	repressor
Biological process:	SOS response
Effector:	DNA damage
Regulog:	LexA - Rhodobacterales
Statistics of regulated genes:
- Genes	8
- Operons	6
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 128 sites [see more]

Member of regulog collections

By trascription factor - LexA
By taxonomy - Rhodobacterales
By TF family - LexA
By effector - DNA damage
By pathway - SOS response

Regulated operons
	Locus Tag	Name	Function
Position: -113 Score: 1.1 Sequence: GAACAAGCCGTGAAC Locus tag: SPO1174 Name: uvrD Funciton: ATP-dependent DNA helicase II
	SPO1174	uvrD	ATP-dependent DNA helicase II
Position: -59 Score: -0.3 Sequence: ACACAAAACAAGAAC Locus tag: SPO2154 Name: lexA Funciton: SOS-response repressor and protease LexA (EC 3.4.21.88)
	SPO2154	lexA	SOS-response repressor and protease LexA (EC 3.4.21.88)
Position: -60 Score: 5.1 Sequence: GTTCCCCTTTCGTGC Locus tag: SPO3117 Name: ruvC Funciton: Crossover junction endodeoxyribonuclease RuvC (EC 3.1.22.4) Locus tag: SPO3116 Name: ruvA Funciton: Holliday junction DNA helicase RuvA Locus tag: SPO3115 Name: ruvB Funciton: Holliday junction DNA helicase RuvB
	SPO3117	ruvC	Crossover junction endodeoxyribonuclease RuvC (EC 3.1.22.4)
	SPO3116	ruvA	Holliday junction DNA helicase RuvA
	SPO3115	ruvB	Holliday junction DNA helicase RuvB
Position: -81 Score: 5.2 Sequence: GTTCTCTTTACGTTC Locus tag: SPO2218 Name: uvrA Funciton: Excinuclease ABC subunit A
	SPO2218	uvrA	Excinuclease ABC subunit A
Position: -109 Score: 5.1 Sequence: GTTCTCTTTTTGATC Position: -87 Score: 1.2 Sequence: GAACAAGAGGTGAAC Locus tag: SPO2034 Name: recA Funciton: Recombinase A
	SPO2034	recA	Recombinase A
Position: -20 Score: 5 Sequence: GTTCACCTATTGTTC Locus tag: SPO1766 Name: PF06319 Funciton: Transcription elongation factor
	SPO1766	PF06319	Transcription elongation factor

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD