Regulon of LexA in Roseovarius nubinhibens ISM

Properties
Regulator type:	Transcription factor
TF locus tag:	ISM_14765
Regulator family:	LexA
Regulation mode:	repressor
Biological process:	SOS response
Effector:	DNA damage
Regulog:	LexA - Rhodobacterales
Statistics of regulated genes:
- Genes	9
- Operons	7
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 128 sites [see more]

Member of regulog collections

By trascription factor - LexA
By taxonomy - Rhodobacterales
By TF family - LexA
By effector - DNA damage
By pathway - SOS response

Regulated operons
	Locus Tag	Name	Function
Position: -56 Score: 0.4 Sequence: GAACAATCGCGGAAC Locus tag: ISM_13365 Name: uvrD Funciton: ATP-dependent DNA helicase II
	ISM_13365	uvrD	ATP-dependent DNA helicase II
Position: -58 Score: -0.5 Sequence: ACACAAAACGAGAAC Locus tag: ISM_14765 Name: lexA Funciton: SOS-response repressor and protease LexA (EC 3.4.21.88)
	ISM_14765	lexA	SOS-response repressor and protease LexA (EC 3.4.21.88)
Position: -60 Score: 5.2 Sequence: GTTCTTGTTTCGTGC Locus tag: ISM_03450 Name: ruvC Funciton: Crossover junction endodeoxyribonuclease RuvC (EC 3.1.22.4) Locus tag: ISM_03445 Name: ruvA Funciton: Holliday junction DNA helicase RuvA Locus tag: ISM_03440 Name: ruvB Funciton: Holliday junction DNA helicase RuvB
	ISM_03450	ruvC	Crossover junction endodeoxyribonuclease RuvC (EC 3.1.22.4)
	ISM_03445	ruvA	Holliday junction DNA helicase RuvA
	ISM_03440	ruvB	Holliday junction DNA helicase RuvB
Position: -77 Score: 4.9 Sequence: GTTCACAGTTTGTTC Locus tag: ISM_10865 Name: uvrA Funciton: Excinuclease ABC subunit A
	ISM_10865	uvrA	Excinuclease ABC subunit A
Position: -27 Score: 5.1 Sequence: GTTCGCGGTTTGTTC Locus tag: ISM_13455 Name: PF04055 Funciton: Radical SAM domain protein
	ISM_13455	PF04055	Radical SAM domain protein
Position: -118 Score: 5.3 Sequence: GTTCTCATTTTGTGC Position: -90 Score: 0.7 Sequence: GAACAGCACGCGAAC Locus tag: ISM_14955 Name: recA Funciton: Recombinase A
	ISM_14955	recA	Recombinase A
Position: -26 Score: 5.1 Sequence: GTTCCCGCTTCGTTC Locus tag: ISM_00090 Name: PF06319 Funciton: Transcription elongation factor
	ISM_00090	PF06319	Transcription elongation factor

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD