Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulon of LexA in Oceanicola batsensis HTCC2597

Properties
Regulator type: Transcription factor
TF locus tag: OB2597_01402
Regulator family: LexA
Regulation mode: repressor
Biological process: SOS response
Effector: DNA damage
Regulog: LexA - Rhodobacterales
Statistics of regulated genes:
- Genes 10
- Operons 8
Visualization:
Allows to visualize regulon content in the context of metabolic pathways
Built upon 128 sites [see more]
Member of regulog collections
Regulated operons
Locus Tag Name Function

Position: -48
Score: 0.3
Sequence: GAACAAAACGTGAAT
Locus tag: OB2597_14496
Name: dnaE2
Funciton: DNA polymerase III alpha subunit (EC 2.7.7.7)
dnaE2
DNA polymerase III alpha subunit (EC 2.7.7.7)

Position: -27
Score: 1.4
Sequence: GAACGTAAAAGGAAC
Locus tag: OB2597_10771
Name: imuB
Funciton: DNA polymerase-like protein PA0670
imuB
DNA polymerase-like protein PA0670

Position: -63
Score: 0.4
Sequence: ACACAAAACATGAAC
Locus tag: OB2597_01402
Name: lexA
Funciton: SOS-response repressor and protease LexA (EC 3.4.21.88)
lexA
SOS-response repressor and protease LexA (EC 3.4.21.88)

Position: -61
Score: 4.7
Sequence: GTTCACTATTCGTGC
Locus tag: OB2597_15620
Name: ruvC
Funciton: Crossover junction endodeoxyribonuclease RuvC (EC 3.1.22.4)
Locus tag: OB2597_15625
Name: ruvA
Funciton: Holliday junction DNA helicase RuvA
Locus tag: OB2597_15630
Name: ruvB
Funciton: Holliday junction DNA helicase RuvB
ruvC
Crossover junction endodeoxyribonuclease RuvC (EC 3.1.22.4)
ruvA
Holliday junction DNA helicase RuvA
ruvB
Holliday junction DNA helicase RuvB

Position: -80
Score: 4.8
Sequence: GTTCGCGCAATGTTC
Locus tag: OB2597_01212
Name: uvrA
Funciton: Excinuclease ABC subunit A
uvrA
Excinuclease ABC subunit A

Position: -27
Score: 5
Sequence: GTTCTCTTAATGTTC
Locus tag: OB2597_03227
Name: PF04055
Funciton: Radical SAM domain protein
PF04055
Radical SAM domain protein

Position: -91
Score: 4.9
Sequence: GTTCTTCTTTTGGTC
Position: -68
Score: 1
Sequence: GAACAAGAGGCGAAC
Locus tag: OB2597_01672
Name: recA
Funciton: Recombinase A
recA
Recombinase A

Position: -26
Score: 4.6
Sequence: GTTCACTAAATGTTC
Locus tag: OB2597_02052
Name: PF06319
Funciton: Transcription elongation factor
PF06319
Transcription elongation factor
Export
Regulated Genes [ Tab delimited format ] DOWNLOAD
Regulatory Sites [ FASTA format ] DOWNLOAD