Regulon of LexA in Oceanicola granulosus HTCC2516

Properties
Regulator type:	Transcription factor
TF locus tag:	OG2516_03218
Regulator family:	LexA
Regulation mode:	repressor
Biological process:	SOS response
Effector:	DNA damage
Regulog:	LexA - Rhodobacterales
Statistics of regulated genes:
- Genes	10
- Operons	8
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 128 sites [see more]

Member of regulog collections

By trascription factor - LexA
By taxonomy - Rhodobacterales
By TF family - LexA
By effector - DNA damage
By pathway - SOS response

Regulated operons
	Locus Tag	Name	Function
Position: -57 Score: -0.1 Sequence: GAACAGAGCGGGAAC Locus tag: OG2516_00125 Name: uvrD Funciton: ATP-dependent DNA helicase II
	OG2516_00125	uvrD	ATP-dependent DNA helicase II
Position: -40 Score: 0.8 Sequence: GAACAAATGAAGAAC Locus tag: OG2516_00284 Name: imuA Funciton: Predicted RecA/RadA recombinase
	OG2516_00284	imuA	Predicted RecA/RadA recombinase
Position: -70 Score: -0.5 Sequence: ACACAAAACGGGAAC Locus tag: OG2516_03218 Name: lexA Funciton: SOS-response repressor and protease LexA (EC 3.4.21.88)
	OG2516_03218	lexA	SOS-response repressor and protease LexA (EC 3.4.21.88)
Position: -50 Score: 4.9 Sequence: GTTCGCTGTTTGTGC Locus tag: OG2516_07702 Name: ruvC Funciton: Crossover junction endodeoxyribonuclease RuvC (EC 3.1.22.4) Locus tag: OG2516_07697 Name: ruvA Funciton: Holliday junction DNA helicase RuvA Locus tag: OG2516_07692 Name: ruvB Funciton: Holliday junction DNA helicase RuvB
	OG2516_07702	ruvC	Crossover junction endodeoxyribonuclease RuvC (EC 3.1.22.4)
	OG2516_07697	ruvA	Holliday junction DNA helicase RuvA
	OG2516_07692	ruvB	Holliday junction DNA helicase RuvB
Position: -80 Score: 5.2 Sequence: GTTCGCGCTATGTTC Locus tag: OG2516_01124 Name: uvrA Funciton: Excinuclease ABC subunit A
	OG2516_01124	uvrA	Excinuclease ABC subunit A
Position: -30 Score: 5.4 Sequence: GTTCTTCTTTTGTTC Locus tag: OG2516_06172 Name: PF04055 Funciton: Radical SAM domain protein
	OG2516_06172	PF04055	Radical SAM domain protein
Position: -91 Score: 5 Sequence: GTTCTCTTTTTGGTC Position: -63 Score: 1 Sequence: GAACAAGAGGCGAAC Locus tag: OG2516_04603 Name: recA Funciton: Recombinase A
	OG2516_04603	recA	Recombinase A
Position: -27 Score: 4.9 Sequence: GTTTCCCTTTTGTTC Locus tag: OG2516_05778 Name: PF06319 Funciton: Transcription elongation factor
	OG2516_05778	PF06319	Transcription elongation factor

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD