Regulon of LexA in Jannaschia sp. CCS1

Properties
Regulator type:	Transcription factor
TF locus tag:	Jann_1874
Regulator family:	LexA
Regulation mode:	repressor
Biological process:	SOS response
Effector:	DNA damage
Regulog:	LexA - Rhodobacterales
Statistics of regulated genes:
- Genes	12
- Operons	8
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 128 sites [see more]

Member of regulog collections

By trascription factor - LexA
By taxonomy - Rhodobacterales
By TF family - LexA
By effector - DNA damage
By pathway - SOS response

Regulated operons
	Locus Tag	Name	Function
Position: -56 Score: 1.5 Sequence: GAACAATCTGCGAAC Locus tag: Jann_2777 Name: uvrD Funciton: ATP-dependent DNA helicase II
	Jann_2777	uvrD	ATP-dependent DNA helicase II
Position: 10 Score: 0.8 Sequence: GAACAAATAGGGAAC Locus tag: Jann_1560 Name: imuA Funciton: Predicted RecA/RadA recombinase Locus tag: Jann_1559 Name: imuB Funciton: DNA polymerase-like protein PA0670 Locus tag: Jann_1558 Name: dnaE2 Funciton: DNA polymerase III alpha subunit (EC 2.7.7.7)
	Jann_1560	imuA	Predicted RecA/RadA recombinase
	Jann_1559	imuB	DNA polymerase-like protein PA0670
	Jann_1558	dnaE2	DNA polymerase III alpha subunit (EC 2.7.7.7)
Position: -77 Score: 1.3 Sequence: GAACATACCCTGAAC Locus tag: Jann_1874 Name: lexA Funciton: SOS-response repressor and protease LexA (EC 3.4.21.88)
	Jann_1874	lexA	SOS-response repressor and protease LexA (EC 3.4.21.88)
Position: 2 Score: 5.2 Sequence: GTTCGCGTTTCGTGC Locus tag: Jann_0964 Name: ruvC Funciton: Crossover junction endodeoxyribonuclease RuvC (EC 3.1.22.4) Locus tag: Jann_0965 Name: ruvA Funciton: Holliday junction DNA helicase RuvA Locus tag: Jann_0966 Name: ruvB Funciton: Holliday junction DNA helicase RuvB
	Jann_0964	ruvC	Crossover junction endodeoxyribonuclease RuvC (EC 3.1.22.4)
	Jann_0965	ruvA	Holliday junction DNA helicase RuvA
	Jann_0966	ruvB	Holliday junction DNA helicase RuvB
Position: -82 Score: 4.5 Sequence: GTTCCTGAAACGTTC Locus tag: Jann_1723 Name: uvrA Funciton: Excinuclease ABC subunit A
	Jann_1723	uvrA	Excinuclease ABC subunit A
Position: -9 Score: 4.7 Sequence: GTTCTTCAAATGTTC Locus tag: Jann_2549 Name: PF04055 Funciton: Radical SAM domain protein
	Jann_2549	PF04055	Radical SAM domain protein
Position: -127 Score: 4.9 Sequence: GTTCTTGTTTTGTTT Position: -98 Score: 0.6 Sequence: GAACAAGACAAGAAC Locus tag: Jann_1986 Name: recA Funciton: Recombinase A
	Jann_1986	recA	Recombinase A
Position: -26 Score: 5 Sequence: GTTCACCTATTGTTC Locus tag: Jann_3406 Name: PF06319 Funciton: Transcription elongation factor
	Jann_3406	PF06319	Transcription elongation factor

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --

Regulon of LexA in Jannaschia sp. CCS1

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --