Regulon of LexA in Methylibium petroleiphilum PM1
| Regulator type: | Transcription factor |
| TF locus tag: | Mpe_A1866 |
| Regulator family: | LexA |
| Regulation mode: | repressor |
| Biological process: | SOS response |
| Effector: | DNA damage |
| Regulog: | LexA - Comamonadaceae |
| Statistics of regulated genes: | |
| - Genes | 14 |
| - Operons | 8 |
| Visualization: | |
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Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Comamonadaceae
- By trascription factor - LexA
- By TF family - LexA
- By effector - DNA damage
- By pathway - SOS response
| Locus Tag | Name | Function | |
|---|---|---|---|
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Position: -49
Score: 5.4 Sequence: TACTGTATTTACGAACAGTA
Locus tag: Mpe_A0910
Name: Aave_0184 Funciton: Conserved hypothetical protein
Locus tag: Mpe_A0909
Name: null Funciton: DinG family ATP-dependent helicase CPE1197 |
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Aave_0184
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Conserved hypothetical protein
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DinG family ATP-dependent helicase CPE1197
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Position: -86
Score: 5.8 Sequence: AGCTGGATAAAAATACAGTC
Position: -67
Score: 5.4 Sequence: CACTGGATAAAAATTCAGTG
Locus tag: Mpe_A1866
Name: lexA Funciton: SOS-response repressor and protease LexA (EC 3.4.21.88) |
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lexA
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SOS-response repressor and protease LexA (EC 3.4.21.88)
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Position: -54
Score: 5.3 Sequence: TACTGTACAAATAACCAGTT
Locus tag: Mpe_A0075
Name: recA Funciton: Recombinase A
Locus tag: Mpe_A0074
Name: recX Funciton: Regulatory protein RecX |
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recA
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Recombinase A
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recX
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Regulatory protein RecX
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Position: -133
Score: 5.2 Sequence: TACTGTATGCCCATACAGTC
Locus tag: Mpe_B0617
Name: imuA Funciton: Predicted RecA/RadA recombinase
Locus tag: Mpe_B0618
Name: imuB Funciton: DNA polymerase-like protein PA0670
Locus tag: Mpe_B0619
Name: dnaE2 Funciton: DNA polymerase III alpha subunit (EC 2.7.7.7) |
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imuA
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Predicted RecA/RadA recombinase
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imuB
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DNA polymerase-like protein PA0670
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dnaE2
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DNA polymerase III alpha subunit (EC 2.7.7.7)
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Position: -6
Score: 5.8 Sequence: TACTGTATGTCCATACAGTA
Locus tag: Mpe_B0052
Name: umuC Funciton: DNA polymerase V, subunit UmuC |
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umuC
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DNA polymerase V, subunit UmuC
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Position: -55
Score: 5.3 Sequence: TACTGTATGGATGTACAGCA
Locus tag: Mpe_B0048
Name: umuD Funciton: DNA polymerase V, subunit UmuD |
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umuD
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DNA polymerase V, subunit UmuD
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Position: -33
Score: 6 Sequence: TACTGTACAAAAATACAGTA
Locus tag: Mpe_A2509
Name: PF04055 Funciton: DNA repair photolyase |
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PF04055
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DNA repair photolyase
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Position: -44
Score: 5.7 Sequence: TACTGTATTTATGTACAGTA
Locus tag: Mpe_A1534
Name: imuA Funciton: Predicted RecA/RadA recombinase
Locus tag: Mpe_A1533
Name: imuB Funciton: DNA polymerase-like protein PA0670
Locus tag: Mpe_A1532
Name: null Funciton: DNA polymerase III alpha subunit (EC 2.7.7.7) |
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imuA
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Predicted RecA/RadA recombinase
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imuB
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DNA polymerase-like protein PA0670
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DNA polymerase III alpha subunit (EC 2.7.7.7)
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |