Profile of regulator LexA in Comamonadaceae
Properties
| Regulator family: |
LexA |
| Regulation mode: |
repressor |
| Biological process: |
SOS response |
| Effector: |
DNA damage |
| Regulog: |
LexA - Comamonadaceae |
Member of regulog collections
Transcription factor binding sites
|
Locus Tag |
Name |
Position |
Score |
Sequence |
|
Acidovorax avenae subsp. citrulli AAC00-1
|
|
Aave_0184 |
Aave_0184 |
-33 |
4.8 |
CACTGTATTTACAATCAGTG |
|
Aave_2670 |
imuA |
-34 |
5.4 |
TGCTGTATATTTGAACAGTA |
|
Aave_2176 |
PF04055 |
-42 |
6.1 |
AACTGTATATTCATACAGTT |
|
Aave_2734 |
imuA |
-43 |
5.7 |
TACTGTATAAATAATCAGTA |
|
Aave_0516 |
imuA |
-49 |
5.9 |
TACTGTTTATTCATACAGTG |
|
Aave_1340 |
parE |
-52 |
4.1 |
GGCTGTCTTTCCATCCAGTA |
|
Aave_4640 |
recA |
-98 |
4.3 |
TACTGGTCAAGCATCCAGCC |
|
Aave_2558 |
lexA |
-95 |
6.1 |
AACTGTTTAAAAATACAGTG |
|
Acidovorax sp. JS42
|
|
Ajs_2310 |
lexA |
-54 |
5.8 |
TACTGGATTAAAAAACAGTA |
|
Ajs_2310 |
lexA |
-73 |
5.5 |
AACTGTTCAAAAATACAGAT |
|
Ajs_2429 |
PF08774 |
-75 |
4.9 |
TGCTGGATGAAATCACAGTA |
|
Ajs_1965 |
imuA |
-85 |
4.9 |
TGCTGGATGAAATCACAGTA |
|
Ajs_2803 |
PF04055 |
-23 |
4.9 |
TGCTGGATGAAATCACAGTA |
|
Ajs_1014 |
parE |
-35 |
4.5 |
TCCTGGTTTTATATCCAGCA |
|
Ajs_4001 |
recA |
-87 |
4.3 |
TACTGTTCAAGCATCCAGCC |
|
Comamonas testosteroni KF-1
|
|
CtesDRAFT_1157 |
lexA |
-67 |
5.6 |
AACTGATTAAAAATACAGGT |
|
CtesDRAFT_1157 |
lexA |
-48 |
5.6 |
TACTGGATGAACACACAGTA |
|
CtesDRAFT_1921 |
imuA |
-35 |
5.6 |
GACTGTATATTTGTACAGTA |
|
CtesDRAFT_1895 |
PF08774 |
-6 |
5.6 |
AGCTGTATGAAAATACAGGT |
|
CtesDRAFT_5182 |
parE |
-52 |
4.4 |
AACTGTGAATTTATCCAGCT |
|
CtesDRAFT_3877 |
recA |
-76 |
4.3 |
TACTGTTCAAGCATCCAGCC |
|
Delftia acidovorans SPH-1
|
|
Daci_3565 |
lexA |
-64 |
4.7 |
TACTGTATAAATCATCAGAT |
|
Daci_3565 |
lexA |
-83 |
5.8 |
AACTGGTTAAAAATACAGAT |
|
Daci_5814 |
PF08774 |
-54 |
5.6 |
GACTGTATAAAGATACAGTT |
|
Daci_4263 |
imuA |
-35 |
5.8 |
TGCTGTATATTCATACAGTA |
|
Daci_2403 |
PF04055 |
2 |
5.6 |
GACTGTATTTTTATACAGTT |
|
Daci_0874 |
recA |
-66 |
4.3 |
TACTGTTCAAGCATCCAGCC |
|
Polaromonas naphthalenivorans CJ2
|
|
Pnap_1918 |
lexA |
-84 |
5.9 |
TACTGGATATTCATACAGTC |
|
Pnap_1918 |
lexA |
-103 |
5.5 |
AGCTGTATAAAAATGCAGTT |
|
Pnap_4894 |
imuA |
-33 |
6 |
TACTGGTTATTCATACAGTA |
|
Pnap_1199 |
parE |
-64 |
5.4 |
AACTGTATGTTTGTACAGGT |
|
Pnap_3956 |
recA |
-102 |
4.4 |
TACTGTTCATGCACCCAGTA |
|
Polaromonas sp. JS666
|
|
Bpro_2954 |
lexA |
-96 |
5.7 |
TACTGGATATTAAAACAGGT |
|
Bpro_2954 |
lexA |
-115 |
6.1 |
AACTGGATGAAAATACAGTT |
|
Bpro_2386 |
imuA |
-56 |
6 |
TACTGTACATAAATACAGTA |
|
Bpro_3135 |
PF04055 |
-137 |
5.3 |
AACTGGGTATTTATCCAGTA |
|
Bpro_4982 |
umuD |
-10 |
5.6 |
TACTGGATGGATGTACAGTA |
|
Bpro_3165 |
parE |
-114 |
5.3 |
AACTGGGTATTTATCCAGTA |
|
Bpro_4685 |
recA |
-146 |
4.2 |
AACTGACTAAAAATAGGGTT |
|
Bpro_0200 |
radA |
-30 |
5.7 |
TACTGGTTGTTTGTACAGTA |
|
Rhodoferax ferrireducens DSM 15236
|
|
Rfer_2994 |
lexA |
-65 |
4.6 |
TACTGAATACAACAACAGTG |
|
Rfer_2994 |
lexA |
-84 |
5.9 |
AACTGATTAAAAATACAGTT |
|
Rfer_1225 |
imuA |
-48 |
5.3 |
TACTGTTGTTTTATACAGTT |
|
Rfer_4342 |
umuD |
-10 |
5 |
TACTGTATGGATGATCAGTA |
|
Rfer_2642 |
parE |
-38 |
4.2 |
AGCTGTGCTTTCATACAGCC |
|
Rfer_3948 |
recA |
-38 |
4.3 |
TACTGTTCAAGCATCCAGCC |
|
Rfer_0500 |
radA |
-31 |
4.9 |
ATCTGTTTTTCCATACAGTA |
|
Variovorax paradoxus S110
|
|
Vapar_2636 |
lexA |
-36 |
4.9 |
TACTGGATATTCAGCCAGTG |
|
Vapar_2636 |
lexA |
-55 |
5.9 |
AACTGGTTAAAAATACAGGT |
|
Vapar_3206 |
imuA |
-32 |
6.4 |
TACTGTATAAAAATACAGTT |
|
Vapar_2806 |
PF06733 |
-26 |
5 |
TACTGTTGTTTTATACAGCA |
|
Vapar_1693 |
PF04055 |
-40 |
5.9 |
TACTGTGTAAACATACAGTA |
|
Vapar_4538 |
imuA |
-32 |
5.5 |
TACTGTTCATCCATACAGTA |
|
Vapar_5195 |
recA |
-83 |
4.3 |
TACTGTTCAAGCATCCAGCC |
|
Verminephrobacter eiseniae EF01-2
|
|
Veis_4912 |
lexA |
-56 |
5.5 |
TACTGGATTGAAAAACAGTT |
|
Veis_4912 |
lexA |
-75 |
5.9 |
AACTGGTTAAAAATACAGCT |
|
Veis_1664 |
parE |
-52 |
5 |
AACTGTTTTTTTATCCAGCT |
|
Veis_0355 |
recA |
-47 |
4.6 |
TACTGTTCAAGCATCCAGCT |
|
Methylibium petroleiphilum PM1
|
|
Mpe_A0910 |
Aave_0184 |
-49 |
5.4 |
TACTGTATTTACGAACAGTA |
|
Mpe_A1866 |
lexA |
-67 |
5.4 |
CACTGGATAAAAATTCAGTG |
|
Mpe_A1866 |
lexA |
-86 |
5.8 |
AGCTGGATAAAAATACAGTC |
|
Mpe_A2509 |
PF04055 |
-33 |
6 |
TACTGTACAAAAATACAGTA |
|
Mpe_B0048 |
umuD |
-55 |
5.3 |
TACTGTATGGATGTACAGCA |
|
Mpe_B0052 |
umuC |
-6 |
5.8 |
TACTGTATGTCCATACAGTA |
|
Mpe_B0617 |
imuA |
-133 |
5.2 |
TACTGTATGCCCATACAGTC |
|
Mpe_A0075 |
recA |
-54 |
5.3 |
TACTGTACAAATAACCAGTT |
|
Mpe_A1534 |
imuA |
-44 |
5.7 |
TACTGTATTTATGTACAGTA |
|
Leptothrix cholodnii SP-6
|
|
Lcho_2082 |
lexA |
-110 |
5.4 |
GACTGGATAAAATTACAGTG |
|
Lcho_2079 |
PF04055 |
-39 |
5.1 |
AACTGTATGCGCATACAGTT |
|
Lcho_0497 |
recA |
-56 |
4.8 |
CACTGTACAAACATCCAGCA |
|
Lcho_2901 |
imuA |
-32 |
5.6 |
GACTGTATGAACATACAGTC |
Export
|
Regulatory Sites
|
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