Regulon of LexA in Delftia acidovorans SPH-1
| Regulator type: | Transcription factor |
| TF locus tag: | Daci_3565 |
| Regulator family: | LexA |
| Regulation mode: | repressor |
| Biological process: | SOS response |
| Effector: | DNA damage |
| Regulog: | LexA - Comamonadaceae |
| Statistics of regulated genes: | |
| - Genes | 9 |
| - Operons | 5 |
| Visualization: | |
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Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Comamonadaceae
- By trascription factor - LexA
- By TF family - LexA
- By effector - DNA damage
- By pathway - SOS response
| Locus Tag | Name | Function | |
|---|---|---|---|
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Position: -83
Score: 5.8 Sequence: AACTGGTTAAAAATACAGAT
Position: -64
Score: 4.7 Sequence: TACTGTATAAATCATCAGAT
Locus tag: Daci_3565
Name: lexA Funciton: SOS-response repressor and protease LexA (EC 3.4.21.88) |
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lexA
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SOS-response repressor and protease LexA (EC 3.4.21.88)
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Position: -35
Score: 5.8 Sequence: TGCTGTATATTCATACAGTA
Locus tag: Daci_4263
Name: imuA Funciton: Predicted RecA/RadA recombinase
Locus tag: Daci_4262
Name: imuB Funciton: DNA polymerase-like protein PA0670
Locus tag: Daci_4261
Name: dnaE2 Funciton: DNA polymerase III alpha subunit (EC 2.7.7.7) |
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imuA
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Predicted RecA/RadA recombinase
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imuB
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DNA polymerase-like protein PA0670
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dnaE2
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DNA polymerase III alpha subunit (EC 2.7.7.7)
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Position: -54
Score: 5.6 Sequence: GACTGTATAAAGATACAGTT
Locus tag: Daci_5814
Name: PF08774 Funciton: Hypothetical protein, restriction endonuclease-like VRR-NUC domain
Locus tag: Daci_5813
Name: PF06733 Funciton: DinG family ATP-dependent helicase CPE1197 |
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PF08774
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Hypothetical protein, restriction endonuclease-like VRR-NUC domain
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PF06733
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DinG family ATP-dependent helicase CPE1197
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Position: 2
Score: 5.6 Sequence: GACTGTATTTTTATACAGTT
Locus tag: Daci_2403
Name: PF04055 Funciton: DNA repair photolyase |
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PF04055
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DNA repair photolyase
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Position: -66
Score: 4.3 Sequence: TACTGTTCAAGCATCCAGCC
Locus tag: Daci_0874
Name: recA Funciton: Recombinase A
Locus tag: Daci_0873
Name: recX Funciton: Regulatory protein RecX |
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recA
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Recombinase A
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recX
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Regulatory protein RecX
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |