Regulon of LexA in Pseudomonas stutzeri A1501
| Regulator type: | Transcription factor |
| TF locus tag: | PST_1734 |
| Regulator family: | LexA |
| Regulation mode: | repressor |
| Biological process: | SOS response |
| Effector: | DNA damage |
| Regulog: | LexA - Pseudomonadaceae |
| Statistics of regulated genes: | |
| - Genes | 18 |
| - Operons | 12 |
| Visualization: | |
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Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By trascription factor - LexA
- By taxonomy - Pseudomonadaceae
- By TF family - LexA
- By effector - DNA damage
- By pathway - SOS response
| Locus Tag | Name | Function | |
|---|---|---|---|
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Position: 24
Score: 5.7 Sequence: ACTGTATCTATATACAGT
Locus tag: PST_2344
Name: imuA Funciton: Predicted RecA/RadA recombinase |
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imuA
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Predicted RecA/RadA recombinase
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Position: -29
Score: 5.4 Sequence: ACTGGATAAATAGACAGC
Locus tag: PST_2810
Name: ruvC Funciton: Crossover junction endodeoxyribonuclease RuvC (EC 3.1.22.4)
Locus tag: PST_2809
Name: ruvA Funciton: Holliday junction DNA helicase RuvA
Locus tag: PST_2808
Name: ruvB Funciton: Holliday junction DNA helicase RuvB |
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ruvC
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Crossover junction endodeoxyribonuclease RuvC (EC 3.1.22.4)
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ruvA
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Holliday junction DNA helicase RuvA
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ruvB
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Holliday junction DNA helicase RuvB
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Position: -184
Score: 5.3 Sequence: ACTGTATGTCCATACAGA
Locus tag: PST_2913
Name: topB Funciton: DNA topoisomerase III (EC 5.99.1.2) |
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topB
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DNA topoisomerase III (EC 5.99.1.2)
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Position: -47
Score: 5.3 Sequence: GCTGTACAAATAAACAGT
Locus tag: PST_3169
Name: yebG Funciton: SOS regulon DNA damage-inducible protein |
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yebG
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SOS regulon DNA damage-inducible protein
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Position: -120
Score: 5.4 Sequence: ACTGAAAATATATACAGC
Locus tag: PST_1523
Name: dinG Funciton: ATP-dependent helicase DinG/Rad3 |
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dinG
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ATP-dependent helicase DinG/Rad3
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Position: 217
Score: 6 Sequence: ACTGTATATATAAACAGC
Locus tag: PST_4159
Name: PF04055 Funciton: DNA repair photolyase |
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PF04055
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DNA repair photolyase
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Position: -215
Score: 5.5 Sequence: ACTGTATATAATCCCAGT
Position: -196
Score: 5.5 Sequence: ACTGTATAAAAGAACAGA
Locus tag: PST_1734
Name: lexA Funciton: SOS-response repressor and protease LexA (EC 3.4.21.88)
Locus tag: PST_1733
Name: sulA Funciton: Cell division inhibitor sulA |
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lexA
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SOS-response repressor and protease LexA (EC 3.4.21.88)
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sulA
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Cell division inhibitor sulA
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Position: -41
Score: 5.7 Sequence: ACTGTATAAATAGCCAGC
Locus tag: PST_3329
Name: recN Funciton: DNA repair protein RecN |
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recN
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DNA repair protein RecN
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Position: -7
Score: 5.5 Sequence: ACTGTATATGCAAACAGT
Locus tag: PST_3962
Name: PSEEN2356 Funciton: Radical SAM domain protein
Locus tag: PST_3963
Name: PSEEN2355 Funciton: Domain often clustered or fused with uracil-DNA glycosylase |
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PSEEN2356
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Radical SAM domain protein
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PSEEN2355
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Domain often clustered or fused with uracil-DNA glycosylase
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Position: -57
Score: 5.6 Sequence: ACTGTCTACTTATACAGT
Locus tag: PST_1508
Name: recA Funciton: Recombinase A
Locus tag: PST_1509
Name: recX Funciton: Regulatory protein RecX |
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recA
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Recombinase A
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recX
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Regulatory protein RecX
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Position: -60
Score: 5.7 Sequence: ACTGTATAAATAGCCAGC
Locus tag: PST_2108
Name: PF08774 Funciton: Hypothetical protein, restriction endonuclease-like VRR-NUC domain
Locus tag: PST_2107
Name: COG1199 Funciton: Rad3-related DNA helicases |
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PF08774
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Hypothetical protein, restriction endonuclease-like VRR-NUC domain
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COG1199
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Rad3-related DNA helicases
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Position: -47
Score: 5.3 Sequence: GCTGTACAAATAAACAGT
Locus tag: PST_3169
Name: PF07130 Funciton: Conserved hypothetical protein |
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PF07130
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Conserved hypothetical protein
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |