Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulon of LexA in Pseudomonas stutzeri A1501

Properties
Regulator type: Transcription factor
TF locus tag: PST_1734
Regulator family: LexA
Regulation mode: repressor
Biological process: SOS response
Effector: DNA damage
Regulog: LexA - Pseudomonadaceae
Statistics of regulated genes:
- Genes 18
- Operons 12
Visualization:
Allows to visualize regulon content in the context of metabolic pathways
Built upon 101 sites [see more]
Member of regulog collections
Regulated operons
Locus Tag Name Function
Position: 24
Score: 5.7
Sequence: ACTGTATCTATATACAGT
Locus tag: PST_2344
Name: imuA
Funciton: Predicted RecA/RadA recombinase
PST_2344
imuA
Predicted RecA/RadA recombinase
Position: -29
Score: 5.4
Sequence: ACTGGATAAATAGACAGC
Locus tag: PST_2810
Name: ruvC
Funciton: Crossover junction endodeoxyribonuclease RuvC (EC 3.1.22.4)
Locus tag: PST_2809
Name: ruvA
Funciton: Holliday junction DNA helicase RuvA
Locus tag: PST_2808
Name: ruvB
Funciton: Holliday junction DNA helicase RuvB
PST_2810
ruvC
Crossover junction endodeoxyribonuclease RuvC (EC 3.1.22.4)
PST_2809
ruvA
Holliday junction DNA helicase RuvA
PST_2808
ruvB
Holliday junction DNA helicase RuvB
Position: -184
Score: 5.3
Sequence: ACTGTATGTCCATACAGA
Locus tag: PST_2913
Name: topB
Funciton: DNA topoisomerase III (EC 5.99.1.2)
PST_2913
topB
DNA topoisomerase III (EC 5.99.1.2)
Position: -47
Score: 5.3
Sequence: GCTGTACAAATAAACAGT
Locus tag: PST_3169
Name: yebG
Funciton: SOS regulon DNA damage-inducible protein
PST_3169
yebG
SOS regulon DNA damage-inducible protein
Position: -120
Score: 5.4
Sequence: ACTGAAAATATATACAGC
Locus tag: PST_1523
Name: dinG
Funciton: ATP-dependent helicase DinG/Rad3
PST_1523
dinG
ATP-dependent helicase DinG/Rad3
Position: 217
Score: 6
Sequence: ACTGTATATATAAACAGC
Locus tag: PST_4159
Name: PF04055
Funciton: DNA repair photolyase
PST_4159
PF04055
DNA repair photolyase
Position: -215
Score: 5.5
Sequence: ACTGTATATAATCCCAGT
Position: -196
Score: 5.5
Sequence: ACTGTATAAAAGAACAGA
Locus tag: PST_1734
Name: lexA
Funciton: SOS-response repressor and protease LexA (EC 3.4.21.88)
Locus tag: PST_1733
Name: sulA
Funciton: Cell division inhibitor sulA
PST_1734
lexA
SOS-response repressor and protease LexA (EC 3.4.21.88)
PST_1733
sulA
Cell division inhibitor sulA
Position: -41
Score: 5.7
Sequence: ACTGTATAAATAGCCAGC
Locus tag: PST_3329
Name: recN
Funciton: DNA repair protein RecN
PST_3329
recN
DNA repair protein RecN
Position: -7
Score: 5.5
Sequence: ACTGTATATGCAAACAGT
Locus tag: PST_3962
Name: PSEEN2356
Funciton: Radical SAM domain protein
Locus tag: PST_3963
Name: PSEEN2355
Funciton: Domain often clustered or fused with uracil-DNA glycosylase
PST_3962
PSEEN2356
Radical SAM domain protein
PST_3963
PSEEN2355
Domain often clustered or fused with uracil-DNA glycosylase
Position: -57
Score: 5.6
Sequence: ACTGTCTACTTATACAGT
Locus tag: PST_1508
Name: recA
Funciton: Recombinase A
Locus tag: PST_1509
Name: recX
Funciton: Regulatory protein RecX
PST_1508
recA
Recombinase A
PST_1509
recX
Regulatory protein RecX
Position: -60
Score: 5.7
Sequence: ACTGTATAAATAGCCAGC
Locus tag: PST_2108
Name: PF08774
Funciton: Hypothetical protein, restriction endonuclease-like VRR-NUC domain
Locus tag: PST_2107
Name: COG1199
Funciton: Rad3-related DNA helicases
PST_2108
PF08774
Hypothetical protein, restriction endonuclease-like VRR-NUC domain
PST_2107
COG1199
Rad3-related DNA helicases
Position: -47
Score: 5.3
Sequence: GCTGTACAAATAAACAGT
Locus tag: PST_3169
Name: PF07130
Funciton: Conserved hypothetical protein
PST_3169
PF07130
Conserved hypothetical protein
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