Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Profile of regulator LexA in Pseudomonadaceae

Properties
Regulator family: LexA
Regulation mode: repressor
Biological process: SOS response
Effector: DNA damage
Regulog: LexA - Pseudomonadaceae
Member of regulog collections
Transcription factor binding sites
Locus Tag Name Position Score Sequence
Pseudomonas aeruginosa PAO1
PA1865 PF08774 -5 5.2 TCTGTATGCATGAACAGT
PA4763 recN -41 5.9 ACTGTATAAATAACCAGA
PA3007 lexA -45 5.5 ACTGTATATAATCCCAGT
PA3007 lexA -26 5.4 ACTGGATAAAAACACAGA
PA0671 imuA -153 5.6 ACTGTATTTACATACAGT
PA3413 PF07130 -57 5.5 ACTGTATGGATAACCAGT
PA2288 PA2288 -58 5.7 ACTGTATGAATGTACAGT
PA3413 yebG -57 5.5 ACTGTATGGATAACCAGT
PA0922 PA0922 -69 5.4 ACTGTATATTCGTACAGC
PA3617 recA -60 5.6 ACTGTCTACTTATACAGT
PA0069 PF04055 -37 5.6 ACTGTATCCATATACAGT
PA1045 dinG -70 5.2 ACTGAAAATTTATCCAGC
Pseudomonas entomophila L48
PSEEN1636 uvrB -43 5.1 ACTGGCTAAATTTACAGT
PSEEN4107 dinB -32 5.3 TCTGTATGAATTTACAGT
PSEEN0776 recN -41 6 ACTGTATAAATATCCAGA
PSEEN3721 lexA -47 5.5 ACTGTATATAATCCCAGT
PSEEN3721 lexA -28 5.7 ACTGTATAAAAAGACAGA
PSEEN4605 PF07130 -59 5.8 ACTGTATAAAGATACAGT
PSEEN3760 PA0922 -32 5.7 GCTGTATATAAATACAGT
PSEEN4605 yebG -59 5.8 ACTGTATAAAGATACAGT
PSEEN1273 dinG -38 5.4 ACTGAAAATATATCCAGC
PSEEN4128 recA -60 5.2 ACTGGCTACTTATACAGT
PSEEN0052 PF04055 -35 5.7 ACTGTATTCATATACAGT
PSEEN2356 PSEEN2356 -33 5.4 ACTGTATGAATAATCAGT
PSEEN2643 PF08774 -45 5.5 TCTGTATGTATAACCAGT
PSEEN1950 PF07867 -36 5.6 ACTGTATGCACATACAGC
PSEEN2193 topB -86 5.6 ACTGTACATACATACAGA
Pseudomonas putida KT2440
PP4729 recN -41 5.9 ACTGTATAAATAACCAGA
PP2143 lexA -46 5.7 ACTGTATATAATTCCAGT
PP2143 lexA -27 5.4 ACTGTACAAAAAGACAGA
PP3773 PF07867 9 5.5 ACTGTACGAATATACAGC
PP1974 uvrB -39 5 ACTGGCTAAATTTACAGC
PP4616 PF07130 -58 5.9 ACTGTATATAGATACAGT
PP3901 PF07867 -36 5.3 ACTGTCTATGCATACAGT
PP1125 dinG -38 5.4 ACTGAAAATATATCCAGC
PP2109 PA0922 -32 5.7 GCTGTATATAAATACAGT
PP1203 dinB -32 5.3 TCTGTATGAATTTACAGT
PP4616 yebG -58 5.9 ACTGTATATAGATACAGT
PP1629 recA -60 4.8 ACTGGCTACTTATACAGG
PP0099 PF04055 -31 6 ACTGTATATTAATACAGT
PP2924 PSEEN2356 -5 5.3 ACTGTATGAATACTCAGT
PP2838 PF08774 -46 5.6 TCTGTATGTATAAACAGT
PP2452 PF07867 -36 5.3 ACTGTATGTGCATACAGC
PP4019 topB -86 4.5 CCTGTACATCCATCCAGA
Pseudomonas syringae pv. tomato str. DC3000
PSPTO4507 recN -40 6 ACTGTATAAATATCCAGA
PSPTO3510 lexA -46 5.5 ACTGTATATAATCCCAGT
PSPTO3510 lexA -27 5.7 ACTGTATAAAAAGCCAGA
PSPTO1197 PF07130 -224 5.9 ACTGTATAAAAACACAGT
PSPTO4120 dinG -48 5.2 ACTGAAAATTTATCCAGC
PSPTO1197 yebG -224 5.9 ACTGTATAAAAACACAGT
PSPTO4033 recA -67 5.1 ACTGTTTACTTATACAGG
PSPTO5254 PF04055 -34 5.3 ACTGTACGGATAAACAGT
PSPTO3272 PF08774 -22 4.9 TCTGTACGGATAACCAGT
PSPTO2365 PF07867 -37 4.8 ACTGTATGCCCGTACAGC
PSPTO2478 topB -87 5.2 TCTGTATATCCATACAGA
PSPTOA0002 umuD -46 5.3 ACTGTACGTCTATACAGT
Pseudomonas fluorescens Pf-5
PFL_0825 recN -41 5.9 ACTGTATAAATAACCAGA
PFL_1949 lexA -46 5.5 ACTGTATATAATCCCAGT
PFL_1949 lexA -27 5.7 ACTGTATAAAAAGACAGA
PFL_0975 PF07130 -111 5.3 CCTGTATATAGATACAGT
PFL_1279 dinG -39 5.2 ACTGAAAATTTATCCAGC
PFL_4225 PFL_4225 -35 5.8 ACTGTATGCATATACAGC
PFL_0975 yebG -111 5.3 CCTGTATATAGATACAGT
PFL_1231 recA -57 4.8 ACTGGCTACTTATACAGG
PFL_0057 PF04055 -32 5.5 ACTGTATGTGCATACAGT
PFL_2524 PSEEN2356 -32 6 ACTGTATATAAAAACAGT
PFL_3199 PF08774 -37 5.4 TCTGTATGCATAACCAGT
PFL_2098 PF07867 -5 5.3 ACTGTATGCACGTACAGC
PFL_4691 umuD -9 5.2 ACTGTATTTTTGTACAGT
Pseudomonas mendocina ymp
Pmen_3626 recN -40 5.9 ACTGTATAAATAACCAGA
Pmen_1587 lexA -45 5.5 ACTGTATATAATCCCAGT
Pmen_1587 lexA -26 5.7 ACTGTATAAAAAGACAGA
Pmen_1936 imuA -37 5.7 ACTGTATGCATAGACAGT
Pmen_3241 PF07130 -57 5.5 ACTGTACAAACAACCAGT
Pmen_1270 ruvC -25 5.6 ACTGGATAAATAGACAGT
Pmen_3015 recA -61 5.2 ACTGGCTACTTATACAGT
Pmen_2106 PA0922 -75 5.2 ACTGTTTATTTGTACAGT
Pmen_1427 dinG -37 5.2 ACTGAAAATTTATCCAGC
Pmen_3241 yebG -57 5.5 ACTGTACAAACAACCAGT
Pmen_4466 PF04055 -34 5.5 ACTGTTCATATATACAGT
Pmen_4146 PSEEN2356 -34 6 ACTGTATAAAAAAACAGT
Pmen_4110 PF08774 -21 5.6 TCTGTATAAAAAACCAGT
Pseudomonas stutzeri A1501
PST_3329 recN -41 5.7 ACTGTATAAATAGCCAGC
PST_1734 lexA -215 5.5 ACTGTATATAATCCCAGT
PST_1734 lexA -196 5.5 ACTGTATAAAAGAACAGA
PST_3169 PF07130 -47 5.3 GCTGTACAAATAAACAGT
PST_2810 ruvC -29 5.4 ACTGGATAAATAGACAGC
PST_1508 recA -57 5.6 ACTGTCTACTTATACAGT
PST_3169 yebG -47 5.3 GCTGTACAAATAAACAGT
PST_3962 PSEEN2356 -7 5.5 ACTGTATATGCAAACAGT
PST_2108 PF08774 -60 5.7 ACTGTATAAATAGCCAGC
PST_1523 dinG -120 5.4 ACTGAAAATATATACAGC
PST_4159 PF04055 217 6 ACTGTATATATAAACAGC
PST_2913 topB -184 5.3 ACTGTATGTCCATACAGA
PST_2344 imuA 24 5.7 ACTGTATCTATATACAGT
Azotobacter vinelandii AvOP
Avin_42990 recN -40 5.9 ACTGTATATATACACAGA
Avin_14510 lexA -46 5.6 ACTGTATATAATCACAGT
Avin_14510 lexA -27 5.4 ACTGGATAAAAAGACAGA
Avin_38560 recA -60 5.6 ACTGTCTACTTATACAGT
Avin_19450 dinG -36 5 ACTGAAAATTTGTCCAGT
Avin_27190 topB -75 5.1 TCTGTATGGACATACAGA
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