Profile of regulator LexA in Pseudomonadaceae
Properties
| Regulator family: |
LexA |
| Regulation mode: |
repressor |
| Biological process: |
SOS response |
| Effector: |
DNA damage |
| Regulog: |
LexA - Pseudomonadaceae |
Member of regulog collections
Transcription factor binding sites
|
Locus Tag |
Name |
Position |
Score |
Sequence |
|
Pseudomonas aeruginosa PAO1
|
|
PA1865 |
PF08774 |
-5 |
5.2 |
TCTGTATGCATGAACAGT |
|
PA4763 |
recN |
-41 |
5.9 |
ACTGTATAAATAACCAGA |
|
PA3007 |
lexA |
-45 |
5.5 |
ACTGTATATAATCCCAGT |
|
PA3007 |
lexA |
-26 |
5.4 |
ACTGGATAAAAACACAGA |
|
PA0671 |
imuA |
-153 |
5.6 |
ACTGTATTTACATACAGT |
|
PA3413 |
PF07130 |
-57 |
5.5 |
ACTGTATGGATAACCAGT |
|
PA2288 |
PA2288 |
-58 |
5.7 |
ACTGTATGAATGTACAGT |
|
PA3413 |
yebG |
-57 |
5.5 |
ACTGTATGGATAACCAGT |
|
PA0922 |
PA0922 |
-69 |
5.4 |
ACTGTATATTCGTACAGC |
|
PA3617 |
recA |
-60 |
5.6 |
ACTGTCTACTTATACAGT |
|
PA0069 |
PF04055 |
-37 |
5.6 |
ACTGTATCCATATACAGT |
|
PA1045 |
dinG |
-70 |
5.2 |
ACTGAAAATTTATCCAGC |
|
Pseudomonas entomophila L48
|
|
PSEEN1636 |
uvrB |
-43 |
5.1 |
ACTGGCTAAATTTACAGT |
|
PSEEN4107 |
dinB |
-32 |
5.3 |
TCTGTATGAATTTACAGT |
|
PSEEN0776 |
recN |
-41 |
6 |
ACTGTATAAATATCCAGA |
|
PSEEN3721 |
lexA |
-47 |
5.5 |
ACTGTATATAATCCCAGT |
|
PSEEN3721 |
lexA |
-28 |
5.7 |
ACTGTATAAAAAGACAGA |
|
PSEEN4605 |
PF07130 |
-59 |
5.8 |
ACTGTATAAAGATACAGT |
|
PSEEN3760 |
PA0922 |
-32 |
5.7 |
GCTGTATATAAATACAGT |
|
PSEEN4605 |
yebG |
-59 |
5.8 |
ACTGTATAAAGATACAGT |
|
PSEEN1273 |
dinG |
-38 |
5.4 |
ACTGAAAATATATCCAGC |
|
PSEEN4128 |
recA |
-60 |
5.2 |
ACTGGCTACTTATACAGT |
|
PSEEN0052 |
PF04055 |
-35 |
5.7 |
ACTGTATTCATATACAGT |
|
PSEEN2356 |
PSEEN2356 |
-33 |
5.4 |
ACTGTATGAATAATCAGT |
|
PSEEN2643 |
PF08774 |
-45 |
5.5 |
TCTGTATGTATAACCAGT |
|
PSEEN1950 |
PF07867 |
-36 |
5.6 |
ACTGTATGCACATACAGC |
|
PSEEN2193 |
topB |
-86 |
5.6 |
ACTGTACATACATACAGA |
|
Pseudomonas putida KT2440
|
|
PP4729 |
recN |
-41 |
5.9 |
ACTGTATAAATAACCAGA |
|
PP2143 |
lexA |
-46 |
5.7 |
ACTGTATATAATTCCAGT |
|
PP2143 |
lexA |
-27 |
5.4 |
ACTGTACAAAAAGACAGA |
|
PP3773 |
PF07867 |
9 |
5.5 |
ACTGTACGAATATACAGC |
|
PP1974 |
uvrB |
-39 |
5 |
ACTGGCTAAATTTACAGC |
|
PP4616 |
PF07130 |
-58 |
5.9 |
ACTGTATATAGATACAGT |
|
PP3901 |
PF07867 |
-36 |
5.3 |
ACTGTCTATGCATACAGT |
|
PP1125 |
dinG |
-38 |
5.4 |
ACTGAAAATATATCCAGC |
|
PP2109 |
PA0922 |
-32 |
5.7 |
GCTGTATATAAATACAGT |
|
PP1203 |
dinB |
-32 |
5.3 |
TCTGTATGAATTTACAGT |
|
PP4616 |
yebG |
-58 |
5.9 |
ACTGTATATAGATACAGT |
|
PP1629 |
recA |
-60 |
4.8 |
ACTGGCTACTTATACAGG |
|
PP0099 |
PF04055 |
-31 |
6 |
ACTGTATATTAATACAGT |
|
PP2924 |
PSEEN2356 |
-5 |
5.3 |
ACTGTATGAATACTCAGT |
|
PP2838 |
PF08774 |
-46 |
5.6 |
TCTGTATGTATAAACAGT |
|
PP2452 |
PF07867 |
-36 |
5.3 |
ACTGTATGTGCATACAGC |
|
PP4019 |
topB |
-86 |
4.5 |
CCTGTACATCCATCCAGA |
|
Pseudomonas syringae pv. tomato str. DC3000
|
|
PSPTO4507 |
recN |
-40 |
6 |
ACTGTATAAATATCCAGA |
|
PSPTO3510 |
lexA |
-46 |
5.5 |
ACTGTATATAATCCCAGT |
|
PSPTO3510 |
lexA |
-27 |
5.7 |
ACTGTATAAAAAGCCAGA |
|
PSPTO1197 |
PF07130 |
-224 |
5.9 |
ACTGTATAAAAACACAGT |
|
PSPTO4120 |
dinG |
-48 |
5.2 |
ACTGAAAATTTATCCAGC |
|
PSPTO1197 |
yebG |
-224 |
5.9 |
ACTGTATAAAAACACAGT |
|
PSPTO4033 |
recA |
-67 |
5.1 |
ACTGTTTACTTATACAGG |
|
PSPTO5254 |
PF04055 |
-34 |
5.3 |
ACTGTACGGATAAACAGT |
|
PSPTO3272 |
PF08774 |
-22 |
4.9 |
TCTGTACGGATAACCAGT |
|
PSPTO2365 |
PF07867 |
-37 |
4.8 |
ACTGTATGCCCGTACAGC |
|
PSPTO2478 |
topB |
-87 |
5.2 |
TCTGTATATCCATACAGA |
|
PSPTOA0002 |
umuD |
-46 |
5.3 |
ACTGTACGTCTATACAGT |
|
Pseudomonas fluorescens Pf-5
|
|
PFL_0825 |
recN |
-41 |
5.9 |
ACTGTATAAATAACCAGA |
|
PFL_1949 |
lexA |
-46 |
5.5 |
ACTGTATATAATCCCAGT |
|
PFL_1949 |
lexA |
-27 |
5.7 |
ACTGTATAAAAAGACAGA |
|
PFL_0975 |
PF07130 |
-111 |
5.3 |
CCTGTATATAGATACAGT |
|
PFL_1279 |
dinG |
-39 |
5.2 |
ACTGAAAATTTATCCAGC |
|
PFL_4225 |
PFL_4225 |
-35 |
5.8 |
ACTGTATGCATATACAGC |
|
PFL_0975 |
yebG |
-111 |
5.3 |
CCTGTATATAGATACAGT |
|
PFL_1231 |
recA |
-57 |
4.8 |
ACTGGCTACTTATACAGG |
|
PFL_0057 |
PF04055 |
-32 |
5.5 |
ACTGTATGTGCATACAGT |
|
PFL_2524 |
PSEEN2356 |
-32 |
6 |
ACTGTATATAAAAACAGT |
|
PFL_3199 |
PF08774 |
-37 |
5.4 |
TCTGTATGCATAACCAGT |
|
PFL_2098 |
PF07867 |
-5 |
5.3 |
ACTGTATGCACGTACAGC |
|
PFL_4691 |
umuD |
-9 |
5.2 |
ACTGTATTTTTGTACAGT |
|
Pseudomonas mendocina ymp
|
|
Pmen_3626 |
recN |
-40 |
5.9 |
ACTGTATAAATAACCAGA |
|
Pmen_1587 |
lexA |
-45 |
5.5 |
ACTGTATATAATCCCAGT |
|
Pmen_1587 |
lexA |
-26 |
5.7 |
ACTGTATAAAAAGACAGA |
|
Pmen_1936 |
imuA |
-37 |
5.7 |
ACTGTATGCATAGACAGT |
|
Pmen_3241 |
PF07130 |
-57 |
5.5 |
ACTGTACAAACAACCAGT |
|
Pmen_1270 |
ruvC |
-25 |
5.6 |
ACTGGATAAATAGACAGT |
|
Pmen_3015 |
recA |
-61 |
5.2 |
ACTGGCTACTTATACAGT |
|
Pmen_2106 |
PA0922 |
-75 |
5.2 |
ACTGTTTATTTGTACAGT |
|
Pmen_1427 |
dinG |
-37 |
5.2 |
ACTGAAAATTTATCCAGC |
|
Pmen_3241 |
yebG |
-57 |
5.5 |
ACTGTACAAACAACCAGT |
|
Pmen_4466 |
PF04055 |
-34 |
5.5 |
ACTGTTCATATATACAGT |
|
Pmen_4146 |
PSEEN2356 |
-34 |
6 |
ACTGTATAAAAAAACAGT |
|
Pmen_4110 |
PF08774 |
-21 |
5.6 |
TCTGTATAAAAAACCAGT |
|
Pseudomonas stutzeri A1501
|
|
PST_3329 |
recN |
-41 |
5.7 |
ACTGTATAAATAGCCAGC |
|
PST_1734 |
lexA |
-215 |
5.5 |
ACTGTATATAATCCCAGT |
|
PST_1734 |
lexA |
-196 |
5.5 |
ACTGTATAAAAGAACAGA |
|
PST_3169 |
PF07130 |
-47 |
5.3 |
GCTGTACAAATAAACAGT |
|
PST_2810 |
ruvC |
-29 |
5.4 |
ACTGGATAAATAGACAGC |
|
PST_1508 |
recA |
-57 |
5.6 |
ACTGTCTACTTATACAGT |
|
PST_3169 |
yebG |
-47 |
5.3 |
GCTGTACAAATAAACAGT |
|
PST_3962 |
PSEEN2356 |
-7 |
5.5 |
ACTGTATATGCAAACAGT |
|
PST_2108 |
PF08774 |
-60 |
5.7 |
ACTGTATAAATAGCCAGC |
|
PST_1523 |
dinG |
-120 |
5.4 |
ACTGAAAATATATACAGC |
|
PST_4159 |
PF04055 |
217 |
6 |
ACTGTATATATAAACAGC |
|
PST_2913 |
topB |
-184 |
5.3 |
ACTGTATGTCCATACAGA |
|
PST_2344 |
imuA |
24 |
5.7 |
ACTGTATCTATATACAGT |
|
Azotobacter vinelandii AvOP
|
|
Avin_42990 |
recN |
-40 |
5.9 |
ACTGTATATATACACAGA |
|
Avin_14510 |
lexA |
-46 |
5.6 |
ACTGTATATAATCACAGT |
|
Avin_14510 |
lexA |
-27 |
5.4 |
ACTGGATAAAAAGACAGA |
|
Avin_38560 |
recA |
-60 |
5.6 |
ACTGTCTACTTATACAGT |
|
Avin_19450 |
dinG |
-36 |
5 |
ACTGAAAATTTGTCCAGT |
|
Avin_27190 |
topB |
-75 |
5.1 |
TCTGTATGGACATACAGA |
Export
|
Regulatory Sites
|
[ FASTA format ]
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