Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulon of LexA in Pseudomonas fluorescens Pf-5

Properties
Regulator type: Transcription factor
TF locus tag: PFL_1949
Regulator family: LexA
Regulation mode: repressor
Biological process: SOS response
Effector: DNA damage
Regulog: LexA - Pseudomonadaceae
Statistics of regulated genes:
- Genes 18
- Operons 12
Visualization:
Allows to visualize regulon content in the context of metabolic pathways
Built upon 101 sites [see more]
Member of regulog collections
Regulated operons
Locus Tag Name Function
Position: -39
Score: 5.2
Sequence: ACTGAAAATTTATCCAGC
Locus tag: PFL_1279
Name: dinG
Funciton: ATP-dependent helicase DinG/Rad3
PFL_1279
dinG
ATP-dependent helicase DinG/Rad3
Position: -111
Score: 5.3
Sequence: CCTGTATATAGATACAGT
Locus tag: PFL_0975
Name: yebG
Funciton: SOS regulon DNA damage-inducible protein
PFL_0975
yebG
SOS regulon DNA damage-inducible protein
Position: -9
Score: 5.2
Sequence: ACTGTATTTTTGTACAGT
Locus tag: PFL_4691
Name: umuD
Funciton: DNA polymerase V, subunit UmuD
Locus tag: PFL_4692
Name: umuC
Funciton: DNA polymerase V, subunit UmuC
PFL_4691
umuD
DNA polymerase V, subunit UmuD
PFL_4692
umuC
DNA polymerase V, subunit UmuC
Position: -57
Score: 4.8
Sequence: ACTGGCTACTTATACAGG
Locus tag: PFL_1231
Name: recA
Funciton: Recombinase A
Locus tag: PFL_1232
Name: recX
Funciton: Regulatory protein RecX
PFL_1231
recA
Recombinase A
PFL_1232
recX
Regulatory protein RecX
Position: -32
Score: 5.5
Sequence: ACTGTATGTGCATACAGT
Locus tag: PFL_0057
Name: PF04055
Funciton: DNA repair photolyase
PFL_0057
PF04055
DNA repair photolyase
Position: -35
Score: 5.8
Sequence: ACTGTATGCATATACAGC
Locus tag: PFL_4225
Name: PFL_4225
Funciton: Hypothetical protein, putative peptidase
Locus tag: PFL_4224
Name: PA0922
Funciton: Predicted replication protein
PFL_4225
PFL_4225
Hypothetical protein, putative peptidase
PFL_4224
PA0922
Predicted replication protein
Position: -5
Score: 5.3
Sequence: ACTGTATGCACGTACAGC
Locus tag: PFL_2098
Name: PF07867
Funciton: Conserved hypothetical protein
PFL_2098
PF07867
Conserved hypothetical protein
Position: -37
Score: 5.4
Sequence: TCTGTATGCATAACCAGT
Locus tag: PFL_3199
Name: PF08774
Funciton: Hypothetical protein, restriction endonuclease-like VRR-NUC domain
Locus tag: PFL_3198
Name: COG1199
Funciton: Rad3-related DNA helicases
PFL_3199
PF08774
Hypothetical protein, restriction endonuclease-like VRR-NUC domain
PFL_3198
COG1199
Rad3-related DNA helicases
Position: -46
Score: 5.5
Sequence: ACTGTATATAATCCCAGT
Position: -27
Score: 5.7
Sequence: ACTGTATAAAAAGACAGA
Locus tag: PFL_1949
Name: lexA
Funciton: SOS-response repressor and protease LexA (EC 3.4.21.88)
Locus tag: PFL_1948
Name: sulA
Funciton: Cell division inhibitor sulA
PFL_1949
lexA
SOS-response repressor and protease LexA (EC 3.4.21.88)
PFL_1948
sulA
Cell division inhibitor sulA
Position: -41
Score: 5.9
Sequence: ACTGTATAAATAACCAGA
Locus tag: PFL_0825
Name: recN
Funciton: DNA repair protein RecN
PFL_0825
recN
DNA repair protein RecN
Position: -32
Score: 6
Sequence: ACTGTATATAAAAACAGT
Locus tag: PFL_2524
Name: PSEEN2356
Funciton: Radical SAM domain protein
Locus tag: PFL_2525
Name: PSEEN2355
Funciton: Domain often clustered or fused with uracil-DNA glycosylase
PFL_2524
PSEEN2356
Radical SAM domain protein
PFL_2525
PSEEN2355
Domain often clustered or fused with uracil-DNA glycosylase
Position: -111
Score: 5.3
Sequence: CCTGTATATAGATACAGT
Locus tag: PFL_0975
Name: PF07130
Funciton: Conserved hypothetical protein
PFL_0975
PF07130
Conserved hypothetical protein
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