Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulon of LexA in Pseudomonas syringae pv. tomato str. DC3000

Properties
Regulator type: Transcription factor
TF locus tag: PSPTO3510
Regulator family: LexA
Regulation mode: repressor
Biological process: SOS response
Effector: DNA damage
Regulog: LexA - Pseudomonadaceae
Statistics of regulated genes:
- Genes 13
- Operons 11
Visualization:
Allows to visualize regulon content in the context of metabolic pathways
Built upon 101 sites [see more]
Member of regulog collections
Regulated operons
Locus Tag Name Function
Position: -48
Score: 5.2
Sequence: ACTGAAAATTTATCCAGC
Locus tag: PSPTO4120
Name: dinG
Funciton: ATP-dependent helicase DinG/Rad3
PSPTO4120
dinG
ATP-dependent helicase DinG/Rad3
Position: -224
Score: 5.9
Sequence: ACTGTATAAAAACACAGT
Locus tag: PSPTO1197
Name: yebG
Funciton: SOS regulon DNA damage-inducible protein
PSPTO1197
yebG
SOS regulon DNA damage-inducible protein
Position: -67
Score: 5.1
Sequence: ACTGTTTACTTATACAGG
Locus tag: PSPTO4033
Name: recA
Funciton: Recombinase A
Locus tag: PSPTO4032
Name: recX
Funciton: Regulatory protein RecX
PSPTO4033
recA
Recombinase A
PSPTO4032
recX
Regulatory protein RecX
Position: -87
Score: 5.2
Sequence: TCTGTATATCCATACAGA
Locus tag: PSPTO2478
Name: topB
Funciton: DNA topoisomerase III (EC 5.99.1.2)
PSPTO2478
topB
DNA topoisomerase III (EC 5.99.1.2)
Position: -46
Score: 5.3
Sequence: ACTGTACGTCTATACAGT
Locus tag: PSPTOA0002
Name: umuD
Funciton: DNA polymerase V, subunit UmuD
PSPTOA0002
umuD
DNA polymerase V, subunit UmuD
Position: -37
Score: 4.8
Sequence: ACTGTATGCCCGTACAGC
Locus tag: PSPTO2365
Name: PF07867
Funciton: Conserved hypothetical protein
PSPTO2365
PF07867
Conserved hypothetical protein
Position: -46
Score: 5.5
Sequence: ACTGTATATAATCCCAGT
Position: -27
Score: 5.7
Sequence: ACTGTATAAAAAGCCAGA
Locus tag: PSPTO3510
Name: lexA
Funciton: SOS-response repressor and protease LexA (EC 3.4.21.88)
Locus tag: PSPTO3511
Name: sulA
Funciton: Cell division inhibitor sulA
PSPTO3510
lexA
SOS-response repressor and protease LexA (EC 3.4.21.88)
PSPTO3511
sulA
Cell division inhibitor sulA
Position: -40
Score: 6
Sequence: ACTGTATAAATATCCAGA
Locus tag: PSPTO4507
Name: recN
Funciton: DNA repair protein RecN
PSPTO4507
recN
DNA repair protein RecN
Position: -34
Score: 5.3
Sequence: ACTGTACGGATAAACAGT
Locus tag: PSPTO5254
Name: PF04055
Funciton: DNA repair photolyase
PSPTO5254
PF04055
DNA repair photolyase
Position: -22
Score: 4.9
Sequence: TCTGTACGGATAACCAGT
Locus tag: PSPTO3272
Name: PF08774
Funciton: Hypothetical protein, restriction endonuclease-like VRR-NUC domain
PSPTO3272
PF08774
Hypothetical protein, restriction endonuclease-like VRR-NUC domain
Position: -224
Score: 5.9
Sequence: ACTGTATAAAAACACAGT
Locus tag: PSPTO1197
Name: PF07130
Funciton: Conserved hypothetical protein
PSPTO1197
PF07130
Conserved hypothetical protein
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