Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulon of LexA in Pseudomonas putida KT2440

Properties
Regulator type: Transcription factor
TF locus tag: PP2143
Regulator family: LexA
Regulation mode: repressor
Biological process: SOS response
Effector: DNA damage
Regulog: LexA - Pseudomonadaceae
Statistics of regulated genes:
- Genes 20
- Operons 16
Visualization:
Allows to visualize regulon content in the context of metabolic pathways
Built upon 101 sites [see more]
Member of regulog collections
Regulated operons
Locus Tag Name Function
Position: -36
Score: 5.3
Sequence: ACTGTATGTGCATACAGC
Locus tag: PP2452
Name: PF07867
Funciton: Conserved hypothetical protein
PP2452
PF07867
Conserved hypothetical protein
Position: -38
Score: 5.4
Sequence: ACTGAAAATATATCCAGC
Locus tag: PP1125
Name: dinG
Funciton: ATP-dependent helicase DinG/Rad3
PP1125
dinG
ATP-dependent helicase DinG/Rad3
Position: -31
Score: 6
Sequence: ACTGTATATTAATACAGT
Locus tag: PP0099
Name: PF04055
Funciton: DNA repair photolyase
PP0099
PF04055
DNA repair photolyase
Position: -58
Score: 5.9
Sequence: ACTGTATATAGATACAGT
Locus tag: PP4616
Name: yebG
Funciton: SOS regulon DNA damage-inducible protein
PP4616
yebG
SOS regulon DNA damage-inducible protein
Position: -86
Score: 4.5
Sequence: CCTGTACATCCATCCAGA
Locus tag: PP4019
Name: topB
Funciton: DNA topoisomerase III (EC 5.99.1.2)
PP4019
topB
DNA topoisomerase III (EC 5.99.1.2)
Position: -60
Score: 4.8
Sequence: ACTGGCTACTTATACAGG
Locus tag: PP1629
Name: recA
Funciton: Recombinase A
Locus tag: PP1630
Name: recX
Funciton: Regulatory protein RecX
PP1629
recA
Recombinase A
PP1630
recX
Regulatory protein RecX
Position: -32
Score: 5.3
Sequence: TCTGTATGAATTTACAGT
Locus tag: PP1203
Name: dinB
Funciton: DNA polymerase IV (EC 2.7.7.7)
PP1203
dinB
DNA polymerase IV (EC 2.7.7.7)
Position: -32
Score: 5.7
Sequence: GCTGTATATAAATACAGT
Locus tag: PP2109
Name: PA0922
Funciton: Predicted replication protein
PP2109
PA0922
Predicted replication protein
Position: -46
Score: 5.7
Sequence: ACTGTATATAATTCCAGT
Position: -27
Score: 5.4
Sequence: ACTGTACAAAAAGACAGA
Locus tag: PP2143
Name: lexA
Funciton: SOS-response repressor and protease LexA (EC 3.4.21.88)
Locus tag: PP2142
Name: sulA
Funciton: Cell division inhibitor sulA
PP2143
lexA
SOS-response repressor and protease LexA (EC 3.4.21.88)
PP2142
sulA
Cell division inhibitor sulA
Position: -41
Score: 5.9
Sequence: ACTGTATAAATAACCAGA
Locus tag: PP4729
Name: recN
Funciton: DNA repair protein RecN
PP4729
recN
DNA repair protein RecN
Position: -36
Score: 5.3
Sequence: ACTGTCTATGCATACAGT
Locus tag: PP3901
Name: PF07867
Funciton: Conserved hypothetical protein
PP3901
PF07867
Conserved hypothetical protein
Position: -5
Score: 5.3
Sequence: ACTGTATGAATACTCAGT
Locus tag: PP2924
Name: PSEEN2356
Funciton: Radical SAM domain protein
Locus tag: PP2923
Name: PSEEN2355
Funciton: Domain often clustered or fused with uracil-DNA glycosylase
PP2924
PSEEN2356
Radical SAM domain protein
PP2923
PSEEN2355
Domain often clustered or fused with uracil-DNA glycosylase
Position: -46
Score: 5.6
Sequence: TCTGTATGTATAAACAGT
Locus tag: PP2838
Name: PF08774
Funciton: Hypothetical protein, restriction endonuclease-like VRR-NUC domain
Locus tag: PP2839
Name: COG1199
Funciton: Rad3-related DNA helicases
PP2838
PF08774
Hypothetical protein, restriction endonuclease-like VRR-NUC domain
PP2839
COG1199
Rad3-related DNA helicases
Position: -39
Score: 5
Sequence: ACTGGCTAAATTTACAGC
Locus tag: PP1974
Name: uvrB
Funciton: Excinuclease ABC subunit B
PP1974
uvrB
Excinuclease ABC subunit B
Position: -58
Score: 5.9
Sequence: ACTGTATATAGATACAGT
Locus tag: PP4616
Name: PF07130
Funciton: Conserved hypothetical protein
PP4616
PF07130
Conserved hypothetical protein
Position: 9
Score: 5.5
Sequence: ACTGTACGAATATACAGC
Locus tag: PP3773
Name: PF07867
Funciton: Hypothetical protein
PP3773
PF07867
Hypothetical protein
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