Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulon of LexA in Colwellia psychrerythraea 34H

Properties
Regulator type: Transcription factor
TF locus tag: CPS_0237
Regulator family: LexA
Regulation mode: repressor
Biological process: SOS response
Effector: DNA damage
Regulog: LexA - Alteromonadales
Statistics of regulated genes:
- Genes 15
- Operons 12
Visualization:
Allows to visualize regulon content in the context of metabolic pathways
Built upon 111 sites [see more]
Member of regulog collections
Regulated operons
Locus Tag Name Function
Position: -58
Score: 6.2
Sequence: TACTGTATAAATTAACAGTT
Locus tag: CPS_3825
Name: recN
Funciton: DNA repair protein RecN
CPS_3825
recN
DNA repair protein RecN
Position: -48
Score: 5.5
Sequence: TCCTGTATATACTACCAGTA
Position: -27
Score: 5.3
Sequence: TACTGTGTAAATTTACAGGC
Locus tag: CPS_0237
Name: lexA
Funciton: SOS-response repressor and protease LexA (EC 3.4.21.88)
CPS_0237
lexA
SOS-response repressor and protease LexA (EC 3.4.21.88)
Position: -55
Score: 5.8
Sequence: TACTGTACGTTTATACAGTA
Locus tag: CPS_3201
Name: SSF52540
Funciton: hypothetical protein, P-loop containing nucleoside triphosphate hydrolase family
CPS_3201
SSF52540
hypothetical protein, P-loop containing nucleoside triphosphate hydrolase family
Position: -60
Score: 5.7
Sequence: TACTGTATAAATATATAGTG
Locus tag: CPS_2116
Name: ruvA
Funciton: Holliday junction DNA helicase RuvA
Locus tag: CPS_2117
Name: ruvB
Funciton: Holliday junction DNA helicase RuvB
CPS_2116
ruvA
Holliday junction DNA helicase RuvA
CPS_2117
ruvB
Holliday junction DNA helicase RuvB
Position: -38
Score: 6
Sequence: TACTGTTTTTATATACAGTT
Locus tag: CPS_1040
Name: dinB
Funciton: DNA polymerase IV (EC 2.7.7.7)
CPS_1040
dinB
DNA polymerase IV (EC 2.7.7.7)
Position: -115
Score: 4.3
Sequence: TACTGTATATCAGTAATGTT
Locus tag: CPS_2115
Name: ruvC
Funciton: Crossover junction endodeoxyribonuclease RuvC (EC 3.1.22.4)
CPS_2115
ruvC
Crossover junction endodeoxyribonuclease RuvC (EC 3.1.22.4)
Position: -130
Score: 5.9
Sequence: TACTGTAATAATAAACAGTA
Locus tag: CPS_0080
Name: uvrD
Funciton: ATP-dependent DNA helicase II
CPS_0080
uvrD
ATP-dependent DNA helicase II
Position: -127
Score: 5.4
Sequence: AACTGTTTTTATATACAGCT
Locus tag: CPS_4298
Name: yebG
Funciton: SOS regulon DNA damage-inducible protein
CPS_4298
yebG
SOS regulon DNA damage-inducible protein
Position: -71
Score: 5.3
Sequence: AGCTGTACATAAAACCAGTA
Locus tag: CPS_4792
Name: topB
Funciton: DNA topoisomerase III (EC 5.99.1.2)
CPS_4792
topB
DNA topoisomerase III (EC 5.99.1.2)
Position: -35
Score: 6.1
Sequence: TACTGTATTTATGTACAGTA
Locus tag: CPS_1635
Name: umuD
Funciton: DNA polymerase V, subunit UmuD
Locus tag: CPS_1636
Name: umuC
Funciton: DNA polymerase V, subunit UmuC
CPS_1635
umuD
DNA polymerase V, subunit UmuD
CPS_1636
umuC
DNA polymerase V, subunit UmuC
Position: -35
Score: 6.3
Sequence: TACTGTATATAATTACAGTA
Locus tag: CPS_2683
Name: umuD
Funciton: DNA polymerase V, subunit UmuD
Locus tag: CPS_2682
Name: umuC
Funciton: DNA polymerase V, subunit UmuC
CPS_2683
umuD
DNA polymerase V, subunit UmuD
CPS_2682
umuC
DNA polymerase V, subunit UmuC
Position: -68
Score: 5.5
Sequence: TACTGTACGAACTTACAGTA
Locus tag: CPS_4134
Name: recA
Funciton: Recombinase A
CPS_4134
recA
Recombinase A
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