Profile of regulator LexA in Alteromonadales
| Regulator family: | LexA |
| Regulation mode: | repressor |
| Biological process: | SOS response |
| Effector: | DNA damage |
| Regulog: | LexA - Alteromonadales |
Member of regulog collections
- By taxonomy - Alteromonadales
- By trascription factor - LexA
- By TF family - LexA
- By effector - DNA damage
- By pathway - SOS response
Transcription factor binding sites
| Locus Tag | Name | Position | Score | Sequence | |
|---|---|---|---|---|---|
| Pseudoalteromonas atlantica T6c | |||||
| Patl_3259 | recA | -106 | 5.4 | AACTGTATGGTTGTACAGTA | |
| Patl_4247 | lexA | -25 | 4.9 | AACTGTATGAAACAACAGGC | |
| Patl_4247 | lexA | -46 | 5.5 | GACTGTATATACTCACAGTT | |
| Patl_4079 | uvrD | -64 | 5.4 | AATTGTATAAAAACACAGTA | |
| Patl_1714 | recN | -26 | 5.7 | TACTGTATATTTGAACAGGT | |
| Patl_1714 | recN | -45 | 5.1 | ATATGTATATATTTACAGTT | |
| Patl_0460 | dinB | -29 | 5.8 | AACTGTTTTTAAATACAGTT | |
| Patl_2012 | Patl_2012 | -28 | 5.5 | CACTGTATAAACAAACAGGC | |
| Patl_2012 | Patl_2012 | -64 | 4.9 | GCATGTATTTTTATACAGTA | |
| Patl_0036 | imuA | -31 | 4.1 | TACAGTAAAAATATACAACC | |
| Patl_2944 | ruvB | -40 | 5.4 | CACTGTATATAAAACCACTA | |
| Patl_0036 | imuA | -44 | 6.2 | TACTGTATGAATATACAGTA | |
| Patl_0776 | topB | -43 | 5.4 | TACTGTCTTTACATACAGTC | |
| Patl_2345 | umuD | -21 | 6.1 | TACTGTATATAATAACAGTG | |
| Patl_1244 | yebG | -63 | 5.6 | AACTGTACATAAAAACAGGT | |
| Alteromonas macleodii 'Deep ecotype' | |||||
| MADE_01729 | ruvC | 7 | 4.7 | TACTGGGTATAGATCCAGGT | |
| MADE_00200 | uvrD | -79 | 5.4 | GACTGTATAAATTAACAGGC | |
| MADE_00753 | dinB | -76 | 5.3 | TACTGTCTTTTTGTACAGTT | |
| MADE_04014 | lexA | -44 | 4.8 | AGGTGTATATACTTACAGGA | |
| MADE_04014 | lexA | -25 | 5 | AACTGTATGAACAGACAGGT | |
| MADE_03079 | recA | -107 | 5.4 | AACTGTATGCTTGTACAGTA | |
| MADE_03780 | yebG | -65 | 6.1 | TACTGTTTATTTATACAGTT | |
| MADE_02270 | recN | -41 | 4.5 | TACTGTATATATCATCATGT | |
| MADE_01066 | Patl_2012 | -64 | 4.9 | CACTGTATAAGAAGCCAGTA | |
| MADE_01066 | Patl_2012 | -81 | 4.8 | TACTGTATACACATACACAC | |
| MADE_03930 | dnaQ | -48 | 5.3 | GGCTGTATAAATATACACTA | |
| MADE_00040 | imuA | -33 | 6.2 | TACTGTATAAAAATACAGTT | |
| MADE_02270 | recN | -60 | 5.7 | TACTGTATATATTATCAGTT | |
| Glaciecola sp. HTCC2999 | |||||
| GHTCC_010100001659 | umuD | -54 | 6.4 | TACTGTATATAAATACAGTT | |
| GHTCC_010100001659 | umuD | -101 | 6 | CACTGTATAAATTAACAGTA | |
| GHTCC_010100000340 | recA | -75 | 6 | CACTGTATAATTATACAGTA | |
| GHTCC_010100004134 | uvrD | -70 | 5.9 | CACTGTATATATCAACAGTT | |
| GHTCC_010100008871 | lexA | -25 | 5.3 | AACTGTATTAATTAACAGGC | |
| GHTCC_010100008506 | recN | -28 | 5.5 | TATTGTATATTTACACAGTG | |
| GHTCC_010100008506 | recN | -47 | 5.3 | TACTGTATATATTTACACAT | |
| GHTCC_010100008871 | lexA | -44 | 5.8 | TACTGGATATACTAACAGTA | |
| GHTCC_010100001654 | yebG | -73 | 5.6 | TACTGTTAATTTATACAGTG | |
| GHTCC_010100001654 | yebG | -120 | 6.2 | AACTGTATTTATATACAGTA | |
| GHTCC_010100005779 | ruvA | -69 | 5.3 | ACTTGTATATATGTACAGTA | |
| GHTCC_010100007177 | dinB | -34 | 5.7 | TACTGGATTAATAAACAGTG | |
| GHTCC_010100006337 | Patl_2012 | -28 | 5.2 | CACTGTATAAATAAACAAGG | |
| GHTCC_010100006337 | Patl_2012 | -61 | 5.8 | GACTGTTTATTTATACAGTA | |
| GHTCC_010100005779 | ruvA | -56 | 4.6 | TACAGTATTTTAGTACACTA | |
| Colwellia psychrerythraea 34H | |||||
| CPS_0237 | lexA | -27 | 5.3 | TACTGTGTAAATTTACAGGC | |
| CPS_0080 | uvrD | -130 | 5.9 | TACTGTAATAATAAACAGTA | |
| CPS_1040 | dinB | -38 | 6 | TACTGTTTTTATATACAGTT | |
| CPS_4134 | recA | -68 | 5.5 | TACTGTACGAACTTACAGTA | |
| CPS_4298 | yebG | -127 | 5.4 | AACTGTTTTTATATACAGCT | |
| CPS_3825 | recN | -58 | 6.2 | TACTGTATAAATTAACAGTT | |
| CPS_4792 | topB | -71 | 5.3 | AGCTGTACATAAAACCAGTA | |
| CPS_3201 | SSF52540 | -55 | 5.8 | TACTGTACGTTTATACAGTA | |
| CPS_0237 | lexA | -48 | 5.5 | TCCTGTATATACTACCAGTA | |
| CPS_2116 | ruvA | -60 | 5.7 | TACTGTATAAATATATAGTG | |
| CPS_2115 | ruvC | -115 | 4.3 | TACTGTATATCAGTAATGTT | |
| CPS_2683 | umuD | -35 | 6.3 | TACTGTATATAATTACAGTA | |
| CPS_1635 | umuD | -35 | 6.1 | TACTGTATTTATGTACAGTA | |
| Alteromonadales bacterium TW-7 | |||||
| ATW7_04497 | recA | -54 | 5 | TACTGTGGTTTCATACAGTA | |
| ATW7_00530 | umuD | -21 | 5.8 | TACTGTACACTTATACAGTA | |
| ATW7_15466 | uvrD | -84 | 5.4 | AGCTGTTCATAAAAACAGTA | |
| ATW7_16997 | lexA | -47 | 5.7 | AACTGTATATACTCACAGTT | |
| ATW7_16997 | lexA | -22 | 5.5 | TACTGTATGGAAAACCAGTT | |
| ATW7_06613 | SSF52540 | -31 | 5.7 | TACTGTATATAAACCCAGTG | |
| ATW7_09848 | yebG | -71 | 6.4 | TACTGTATATAAAAACAGTA | |
| ATW7_06613 | SSF52540 | -44 | 5.4 | TACTGTATACATGTACTGTA | |
| ATW7_06923 | recN | -43 | 5.7 | CACTGTATAAATTACCAGTT | |
| ATW7_06923 | recN | -19 | 5.5 | AACTGGATGGATAAACAGTA | |
| ATW7_03087 | ATW7_03087 | -49 | 5.9 | TACTGTACATTTAAACAGTG | |
| ATW7_09096 | dnaQ | 8 | 6 | TACTGTTTTTATATACAGTT | |
| ATW7_10960 | topB | -32 | 5.9 | TACTGTTTATATAACCAGTT | |
| ATW7_11140 | dinB | -41 | 5.2 | CACTGTATTTTTATACAGCC | |
| Pseudoalteromonas haloplanktis TAC125 | |||||
| PSHAa2389 | dinB | -32 | 5.7 | GGCTGTATAAATAAACAGTT | |
| PSHAa1877 | ruvC | -69 | 5.3 | TACTGGTAATTTATACAGTG | |
| PSHAa1218 | recN | -43 | 6 | CACTGTATAAATTAACAGTT | |
| PSHAa0122 | uvrD | -84 | 5.5 | AGCTGTGTATAAAAACAGTA | |
| PSHAa2873 | lexA | -91 | 5.5 | TACTGTATGGAAAACCAGTT | |
| PSHAa1159 | SSF52540 | -32 | 5.6 | TACTGTATAAAAACCCAGTG | |
| PSHAa0834 | yebG | -70 | 6.1 | TACTGTACATAAAAACAGTA | |
| PSHAa0694 | recA | -53 | 5.2 | TACTGTGATTTCATACAGTA | |
| PSHAa1218 | recN | -19 | 5.3 | GACTGGATGGATAAACAGTA | |
| PSHAa1996 | dnaQ | 8 | 5.4 | TACTGTTTTTATATACAGCC | |
| PSHAb0389 | ATW7_03087 | -49 | 6.3 | AACTGTATATATAAACAGTG | |
| PSHAa2356 | topB | -94 | 4.1 | AACTAGAGATATATAAAGTT | |
| PSHAa1159 | SSF52540 | -45 | 4.9 | TACTGTATATGGGTACTGTA | |
| PSHAa2873 | lexA | -116 | 5.7 | AACTGTATATACTCACAGTT | |
| PSHAb0537 | umuD | -41 | 5.8 | TACTGTATACTTGTACAGTA | |
| Pseudoalteromonas tunicata D2 | |||||
| PTD2_22617 | ruvC | -66 | 5.2 | CACTGGTAATTTATACAGTT | |
| PTD2_17880 | umuD | -21 | 6 | TACTGTATATAACTACAGTA | |
| PTD2_16946 | lexA | -45 | 5.5 | AGCTGTATATAATCACAGTA | |
| PTD2_13014 | recA | -55 | 5.5 | TACTGTTAATCTATACAGTA | |
| PTD2_09564 | uvrD | -84 | 5.4 | ACCTGTTCATAAAAACAGTA | |
| PTD2_18455 | SSF52540 | -28 | 5.7 | CACTGTATAAACAACCAGTA | |
| PTD2_12644 | dinB | -52 | 6.1 | TACTGTATAAAAAAACAGTG | |
| PTD2_10739 | recN | -43 | 6.2 | TACTGTATAAATTAACAGTT | |
| PTD2_09304 | topB | -33 | 5.2 | CACTGTTAATCTATACAGTT | |
| PTD2_15577 | yebG | -85 | 6.3 | TACTGTATATAAAAACAGTG | |
| PTD2_02786 | ATW7_03087 | -38 | 6 | CACTGTATATAAAAACAGTG | |
| PTD2_10739 | recN | -19 | 5.5 | AACTGGATGGATAAACAGTA | |
| Idiomarina baltica OS145 | |||||
| OS145_02170 | lexA | -47 | 5.4 | ACCTGTATATACTCACAGTA | |
| OS145_09368 | uvrD | -66 | 5.1 | AACTGGTTGCTTATACAGTA | |
| OS145_07237 | recA | -57 | 5.7 | TACTGTGAATTTATACAGTA | |
| OS145_12305 | recN | -52 | 5.8 | TACTGTATAGGTAAACAGTA | |
| OS145_09460 | imuA | -36 | 6.3 | TACTGTACATATATACAGTA | |
| OS145_02170 | lexA | -27 | 5.6 | TACTGTACAGATAAACAGGT | |
| Idiomarina loihiensis L2TR | |||||
| IL0262 | lexA | -46 | 5.4 | ACCTGTATATACTCACAGTA | |
| IL0742 | recA | -59 | 5.5 | TACTGTAAATGTGTACAGTA | |
| IL0742 | recA | -39 | 5.7 | TACTGTTTATAAAACCAGTG | |
| IL2551 | uvrD | -83 | 5.1 | TACTGGTTGCTTATACAGTG | |
| IL0989 | recN | -34 | 5.6 | ACCTGTATATATCAACAGTA | |
| IL2568 | imuA | -32 | 6.3 | TACTGTATATATGTACAGTA | |
| IL1548 | yebG | -48 | 6.1 | TACTGTACAAATAAACAGTA | |
| IL0262 | lexA | -25 | 5.5 | CACTGTACAAATAAACAGGT | |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |