Regulon of RbsR in Variovorax paradoxus S110

Properties
Regulator type:	Transcription factor
TF locus tag:	Vapar_4639
Regulator family:	LacI
Regulation mode:	repressor
Biological process:	Ribose utilization
Effector:	Ribose
Regulog:	RbsR - Comamonadaceae
Statistics of regulated genes:
- Genes	6
- Operons	1
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 2 sites [see more]

Member of regulog collections

By taxonomy - Comamonadaceae
By trascription factor - RbsR
By TF family - LacI
By effector - Ribose
By pathway - Ribose utilization

Regulated operons
	Locus Tag	Name	Function
Position: -95 Score: 6.6 Sequence: ATTAGCAAACGTTTGCGCAA Locus tag: Vapar_4636 Name: rbsB Funciton: Ribose ABC transport system, periplasmic ribose-binding protein RbsB (TC 3.A.1.2.1) Locus tag: Vapar_4637 Name: rbsA Funciton: Ribose ABC transport system, ATP-binding protein RbsA (TC 3.A.1.2.1) Locus tag: Vapar_4638 Name: rbsC Funciton: Ribose ABC transport system, permease protein RbsC (TC 3.A.1.2.1) Locus tag: Vapar_4639 Name: rbsR Funciton: Transcriptional repressor of ribose utilization, LacI family Locus tag: Vapar_4640 Name: rbsK Funciton: Ribokinase (EC 2.7.1.15) Locus tag: Vapar_4641 Name: rbsD Funciton: D-ribose pyranase (D-ribose mutarotase) (EC 5.5.1.n1)
	Vapar_4636	rbsB	Ribose ABC transport system, periplasmic ribose-binding protein RbsB (TC 3.A.1.2.1)
	Vapar_4637	rbsA	Ribose ABC transport system, ATP-binding protein RbsA (TC 3.A.1.2.1)
	Vapar_4638	rbsC	Ribose ABC transport system, permease protein RbsC (TC 3.A.1.2.1)
	Vapar_4639	rbsR	Transcriptional repressor of ribose utilization, LacI family
	Vapar_4640	rbsK	Ribokinase (EC 2.7.1.15)
	Vapar_4641	rbsD	D-ribose pyranase (D-ribose mutarotase) (EC 5.5.1.n1)

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	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
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