Regulon of UxuR in Marinomonas sp. MWYL1
| Regulator type: | Transcription factor |
| TF locus tag: | Mmwyl1_2785 |
| Regulator family: | GntR/Others |
| Regulation mode: | repressor |
| Biological process: | Glucuronate utilization |
| Effector: | Glucuronate |
| Regulog: | UxuR - Oceanospirillales/Alteromonadales |
| Statistics of regulated genes: | |
| - Genes | 9 |
| - Operons | 3 |
| Visualization: | |
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Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Oceanospirillales/Alteromonadales
- By trascription factor - ExuR/UxuR
- By TF family - GntR/Others
- By effector - Glucuronate
- By pathway - Glucuronate utilization
| Locus Tag | Name | Function | |
|---|---|---|---|
|
Position: -112
Score: 5.4 Sequence: AATTTGGTCAACCAATCT
Position: -90
Score: 4.6 Sequence: AAGTTAGTTGACCAAAAT
Locus tag: Mmwyl1_2783
Name: uxuQ Funciton: predicted glucuronate TRAP transporter, small subunit
Locus tag: Mmwyl1_2782
Name: uxuM Funciton: predicted glucuronate TRAP transporter, large subunit
Locus tag: Mmwyl1_2781
Name: lfaA Funciton: Alpha-glucosidase (EC 3.2.1.20)
Locus tag: Mmwyl1_2780
Name: uxaC Funciton: Uronate isomerase (EC 5.3.1.12)
Locus tag: Mmwyl1_2779
Name: uxuB Funciton: D-mannonate oxidoreductase (EC 1.1.1.57)
Locus tag: Mmwyl1_2778
Name: uxuA Funciton: Mannonate dehydratase (EC 4.2.1.8) |
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uxuQ
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predicted glucuronate TRAP transporter, small subunit
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uxuM
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predicted glucuronate TRAP transporter, large subunit
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lfaA
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Alpha-glucosidase (EC 3.2.1.20)
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uxaC
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Uronate isomerase (EC 5.3.1.12)
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uxuB
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D-mannonate oxidoreductase (EC 1.1.1.57)
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uxuA
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Mannonate dehydratase (EC 4.2.1.8)
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Position: -136
Score: 4.4 Sequence: ATTTTGGTCAACTAACTT
Position: -114
Score: 5.6 Sequence: AGATTGGTTGACCAAATT
Locus tag: Mmwyl1_2784
Name: uxuP Funciton: predicted glucuronate TRAP transporter, periplasmic subunit
Locus tag: Mmwyl1_2785
Name: uxuR Funciton: D-glucuronate repressor, GntR family |
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uxuP
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predicted glucuronate TRAP transporter, periplasmic subunit
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uxuR
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D-glucuronate repressor, GntR family
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Position: -163
Score: 4.4 Sequence: TTAAAGGTGGACCAAATT
Locus tag: Mmwyl1_3059
Name: bglX Funciton: Periplasmic beta-glucosidase precursor |
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bglX
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Periplasmic beta-glucosidase precursor
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |