Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulon of Fur in Caulobacter crescentus CB15

Properties
Regulator type: Transcription factor
TF locus tag: CC0057
Regulator family: FUR
Regulation mode: repressor (activator)
Biological process: Iron homeostasis
Effector: Iron ion, (Fe2+)
Regulog: Fur - Caulobacterales
Statistics of regulated genes:
- Genes 37
- Operons 9
Visualization:
Allows to visualize regulon content in the context of metabolic pathways
Built upon 38 sites [see more]
Member of regulog collections
Regulated operons
Locus Tag Name Function
Position: -62
Score: 4.2
Sequence: ATTGCAATTCGTTCTCAAG
Locus tag: CC3059
Name: PF03929
Funciton: PepSY-associated TM helix domain-containing protein
Locus tag: CC3060
Name: null
Funciton: Putative exported protein
Locus tag: CC3061
Name: null
Funciton: Putative exported protein
CC3059
PF03929
PepSY-associated TM helix domain-containing protein
CC3060
Putative exported protein
CC3061
Putative exported protein
Position: -143
Score: 4.1
Sequence: ACTGATAATCGTTCGCAAT
Locus tag: CC0711
Name: feoA
Funciton: Ferrous iron transport protein A
Locus tag: CC0712
Name: feoB
Funciton: Ferrous iron transport protein B
CC0711
feoA
Ferrous iron transport protein A
CC0712
feoB
Ferrous iron transport protein B
Position: 148
Score: 5.3
Sequence: ATTGCGACGGCGCCGCAAC
Position: 170
Score: 4.4
Sequence: GATAAGAACGCCTCGCAAT
Locus tag: CC0028
Name: omp2
Funciton: TonB-dependent siderophore receptor
CC0028
omp2
TonB-dependent siderophore receptor
Position: -75
Score: 4.3
Sequence: AGTGAGAGTCAGTTGCAAA
Position: -38
Score: 4.8
Sequence: GATGAGAATGACACTCAAT
Locus tag: CC3263
Name: bfd
Funciton: Bacterioferritin-associated ferredoxin
Locus tag: CC3262
Name: bfr
Funciton: Bacterioferritin
CC3263
bfd
Bacterioferritin-associated ferredoxin
CC3262
bfr
Bacterioferritin
Position: -96
Score: 5.4
Sequence: ATTGCAAGTCAGTCGCATC
Position: -72
Score: 4.3
Sequence: ATTGCGAGTGACACTCAGA
Locus tag: CC0139
Name: omp3
Funciton: TonB-dependent siderophore receptor
CC0139
omp3
TonB-dependent siderophore receptor
Position: -129
Score: 5
Sequence: TTTGCGATTGACTCGCAAT
Position: -95
Score: 4.8
Sequence: CTTGCGAAGCATTCTCAAG
Locus tag: CC2367
Name: null
Funciton: Hypothetical protein
CC2367
Hypothetical protein
Position: -33
Score: 5.9
Sequence: ATTGCGACGCACTCGCAAT
Locus tag: CC2928
Name: omp1
Funciton: TonB-dependent siderophore receptor
Locus tag: CC2927
Name: piuB
Funciton: Uncharacterized iron-regulated membrane protein; Iron-uptake factor PiuB
Locus tag: CC2926
Name: null
Funciton: Hypothetical protein
CC2928
omp1
TonB-dependent siderophore receptor
CC2927
piuB
Uncharacterized iron-regulated membrane protein; Iron-uptake factor PiuB
CC2926
Hypothetical protein
Position: -87
Score: 4.6
Sequence: GTTGCGAACGTTTCTCAAT
Locus tag: CC1956
Name: nuoA
Funciton: NADH ubiquinone oxidoreductase chain A (EC 1.6.5.3)
Locus tag: CC1955
Name: nuoB
Funciton: NADH-ubiquinone oxidoreductase chain B (EC 1.6.5.3)
Locus tag: CC1954
Name: nuoC
Funciton: NADH-ubiquinone oxidoreductase chain C (EC 1.6.5.3)
Locus tag: CC1953
Name: null
Funciton: Hypothetical protein
Locus tag: CC1952
Name: nuoD
Funciton: NADH-ubiquinone oxidoreductase chain D (EC 1.6.5.3)
Locus tag: CC1951
Name: null
Funciton: Hypothetical protein
Locus tag: CC1950
Name: nuoE
Funciton: NADH-ubiquinone oxidoreductase chain E (EC 1.6.5.3)
Locus tag: CC1949
Name: null
Funciton: Hypothetical protein
Locus tag: CC1948
Name: null
Funciton: hypothetical protein
Locus tag: CC1947
Name: nuoF
Funciton: NADH-ubiquinone oxidoreductase chain F (EC 1.6.5.3)
Locus tag: CC1946
Name: nuoG
Funciton: NADH-ubiquinone oxidoreductase chain G (EC 1.6.5.3)
Locus tag: CC1945
Name: nuoH
Funciton: NADH-ubiquinone oxidoreductase chain H (EC 1.6.5.3)
Locus tag: CC1944
Name: null
Funciton: Hypothetical protein
Locus tag: CC1943
Name: null
Funciton: Hypothetical protein
Locus tag: CC1942
Name: nuoI
Funciton: NADH-ubiquinone oxidoreductase chain I (EC 1.6.5.3)
Locus tag: CC1941
Name: nuoJ
Funciton: NADH-ubiquinone oxidoreductase chain J (EC 1.6.5.3)
Locus tag: CC1940
Name: nuoK
Funciton: NADH-ubiquinone oxidoreductase chain K (EC 1.6.5.3)
Locus tag: CC1939
Name: nuoL
Funciton: NADH-ubiquinone oxidoreductase chain L (EC 1.6.5.3)
Locus tag: CC1938
Name: nuoM
Funciton: NADH-ubiquinone oxidoreductase chain M (EC 1.6.5.3)
Locus tag: CC1937
Name: nuoN
Funciton: NADH-ubiquinone oxidoreductase chain N (EC 1.6.5.3)
Locus tag: CC1936
Name: birA
Funciton: Biotin-protein ligase (EC 6.3.4.15)
Locus tag: CC1935
Name: coaX
Funciton: Pantothenate kinase type III, CoaX-like (EC 2.7.1.33)
Locus tag: CC1934
Name: rnj
Funciton: Ribonuclease J
CC1956
nuoA
NADH ubiquinone oxidoreductase chain A (EC 1.6.5.3)
CC1955
nuoB
NADH-ubiquinone oxidoreductase chain B (EC 1.6.5.3)
CC1954
nuoC
NADH-ubiquinone oxidoreductase chain C (EC 1.6.5.3)
CC1953
Hypothetical protein
CC1952
nuoD
NADH-ubiquinone oxidoreductase chain D (EC 1.6.5.3)
CC1951
Hypothetical protein
CC1950
nuoE
NADH-ubiquinone oxidoreductase chain E (EC 1.6.5.3)
CC1949
Hypothetical protein
CC1948
hypothetical protein
CC1947
nuoF
NADH-ubiquinone oxidoreductase chain F (EC 1.6.5.3)
CC1946
nuoG
NADH-ubiquinone oxidoreductase chain G (EC 1.6.5.3)
CC1945
nuoH
NADH-ubiquinone oxidoreductase chain H (EC 1.6.5.3)
CC1944
Hypothetical protein
CC1943
Hypothetical protein
CC1942
nuoI
NADH-ubiquinone oxidoreductase chain I (EC 1.6.5.3)
CC1941
nuoJ
NADH-ubiquinone oxidoreductase chain J (EC 1.6.5.3)
CC1940
nuoK
NADH-ubiquinone oxidoreductase chain K (EC 1.6.5.3)
CC1939
nuoL
NADH-ubiquinone oxidoreductase chain L (EC 1.6.5.3)
CC1938
nuoM
NADH-ubiquinone oxidoreductase chain M (EC 1.6.5.3)
CC1937
nuoN
NADH-ubiquinone oxidoreductase chain N (EC 1.6.5.3)
CC1936
birA
Biotin-protein ligase (EC 6.3.4.15)
CC1935
coaX
Pantothenate kinase type III, CoaX-like (EC 2.7.1.33)
CC1934
rnj
Ribonuclease J
Position: -43
Score: 5.1
Sequence: GTTGCGAGCCATTCGCATG
Locus tag: CC2194
Name: omp4
Funciton: TonB-dependent siderophore receptor
CC2194
omp4
TonB-dependent siderophore receptor
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