Regulon of Fur in Sphingopyxis alaskensis RB2256

Properties
Regulator type:	Transcription factor
TF locus tag:	Sala_2066
Regulator family:	FUR
Regulation mode:	repressor (activator)
Biological process:	Iron homeostasis
Effector:	Iron ion, (Fe2+)
Regulog:	Fur - Sphingomonadales
Statistics of regulated genes:
- Genes	17
- Operons	10
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 74 sites [see more]

Member of regulog collections

By taxonomy - Sphingomonadales
By trascription factor - FUR
By TF family - FUR
By effector - Iron ion, (Fe2+)
By pathway - Iron homeostasis

Regulated operons
	Locus Tag	Name	Function
Position: 52 Score: 5 Sequence: GTTGCAATTCGCTCGCATT Locus tag: Sala_2091 Name: omp1 Funciton: TonB-dependent siderophore receptor
	Sala_2091	omp1	TonB-dependent siderophore receptor
Position: -353 Score: 5.2 Sequence: ACTGCGAACCAGTCGCATC Position: -328 Score: 4.9 Sequence: GTTGCGAATCTGTCGCACT Position: -292 Score: 4.7 Sequence: GTTGAGAAGGATTCGCACA Locus tag: Sala_0588 Name: bfr Funciton: Bacterioferritin
	Sala_0588	bfr	Bacterioferritin
Position: -62 Score: 5.2 Sequence: AATGCAACTAATTCGCATT Locus tag: Sala_0947 Name: omp2 Funciton: TonB-dependent siderophore receptor
	Sala_0947	omp2	TonB-dependent siderophore receptor
Position: -144 Score: 5.5 Sequence: ATTGCGATTAATTCTCAAT Locus tag: Sala_0587 Name: null Funciton: Hypothetical protein
	Sala_0587		Hypothetical protein
Position: -117 Score: 5.5 Sequence: ACTGCGAATCGTTCGCACT Locus tag: Sala_1206 Name: hemA Funciton: 5-aminolevulinate synthase (EC 2.3.1.37) Locus tag: Sala_1205 Name: null Funciton: Putative nitroreductase
	Sala_1206	hemA	5-aminolevulinate synthase (EC 2.3.1.37)
	Sala_1205		Putative nitroreductase
Position: -36 Score: 5.8 Sequence: TTTGCGAATTGTTCGCAAT Locus tag: Sala_0794 Name: sufS Funciton: Cysteine desulfurase (EC 2.8.1.7) Locus tag: Sala_0795 Name: fdx Funciton: Ferredoxin, 2Fe-2S
	Sala_0794	sufS	Cysteine desulfurase (EC 2.8.1.7)
	Sala_0795	fdx	Ferredoxin, 2Fe-2S
Position: -34 Score: 5.2 Sequence: GTTAAGAATCGTTCGCAAC Locus tag: Sala_0675 Name: iscR Funciton: Iron-sulfur cluster regulator IscR Locus tag: Sala_0674 Name: sufB Funciton: Iron-sulfur cluster assembly protein SufB Locus tag: Sala_0673 Name: null Funciton: DNA methylase, putative Locus tag: Sala_0672 Name: null Funciton: Acetyltransferase, GNAT family Locus tag: Sala_0671 Name: sufC Funciton: Iron-sulfur cluster assembly ATPase protein SufC
	Sala_0675	iscR	Iron-sulfur cluster regulator IscR
	Sala_0674	sufB	Iron-sulfur cluster assembly protein SufB
	Sala_0673		DNA methylase, putative
	Sala_0672		Acetyltransferase, GNAT family
	Sala_0671	sufC	Iron-sulfur cluster assembly ATPase protein SufC
Position: -27 Score: 5 Sequence: ATTGATAATCGCTCGCAAA Locus tag: Sala_2986 Name: feoA Funciton: Ferrous iron transport protein A Locus tag: Sala_2987 Name: feoB Funciton: Ferrous iron transport protein B
	Sala_2986	feoA	Ferrous iron transport protein A
	Sala_2987	feoB	Ferrous iron transport protein B
Position: -173 Score: 5.1 Sequence: ATTGCGAACTAATAGCAAA Locus tag: Sala_2230 Name: mdh Funciton: Malate dehydrogenase (EC 1.1.1.37)
	Sala_2230	mdh	Malate dehydrogenase (EC 1.1.1.37)
Position: -190 Score: 5 Sequence: ATTGCAAATGAGTTGCACT Locus tag: Sala_1032 Name: fpr Funciton: Ferredoxin-NADP reductase
	Sala_1032	fpr	Ferredoxin-NADP reductase

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --

Regulon of Fur in Sphingopyxis alaskensis RB2256

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --