Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulon of Fur in Alteromonadales bacterium TW-7

Properties
Regulator type: Transcription factor
TF locus tag: ATW7_13293
Regulator family: FUR
Regulation mode: repressor (activator)
Biological process: Iron homeostasis
Effector: Iron ion, (Fe2+)
Regulog: Fur - Alteromonadales
Statistics of regulated genes:
- Genes 29
- Operons 16
Visualization:
Allows to visualize regulon content in the context of metabolic pathways
Built upon 142 sites [see more]
Member of regulog collections
Regulated operons
Locus Tag Name Function
Position: -67
Score: 5.3
Sequence: AAATGATAATTGTTGCTATTT
Locus tag: ATW7_04502
Name: null
Funciton: Ferrichrome-iron receptor
ATW7_04502
Ferrichrome-iron receptor
Position: -257
Score: 5
Sequence: TAATGACAATAGCTATCATCT
Locus tag: ATW7_11686
Name: CPS_4762
Funciton: Ferric siderophore transport system, periplasmic binding protein TonB
ATW7_11686
CPS_4762
Ferric siderophore transport system, periplasmic binding protein TonB
Position: -61
Score: 5.1
Sequence: AAATAGAAATCATTACCATTA
Locus tag: ATW7_00730
Name: ATW7_00730
Funciton: Siderophore biosynthesis L-2,4-diaminobutyrate decarboxylase
Locus tag: ATW7_00735
Name: ATW7_00735
Funciton: Siderophore biosynthesis protein, monooxygenase
Locus tag: ATW7_00740
Name: ATW7_00740
Funciton: Siderophore related permease
ATW7_00730
ATW7_00730
Siderophore biosynthesis L-2,4-diaminobutyrate decarboxylase
ATW7_00735
ATW7_00735
Siderophore biosynthesis protein, monooxygenase
ATW7_00740
ATW7_00740
Siderophore related permease
Position: -74
Score: 4.9
Sequence: TAATAATATTGATTCGCATTC
Locus tag: ATW7_03447
Name: fecA
Funciton: TonB-dependent receptor; Outer membrane receptor for ferrienterochelin and colicins
ATW7_03447
fecA
TonB-dependent receptor; Outer membrane receptor for ferrienterochelin and colicins
Position: -87
Score: 5.2
Sequence: AAATGAGAATCACTATCTTTT
Locus tag: ATW7_00890
Name: ATW7_00890
Funciton: iron uptake protein
Locus tag: ATW7_00895
Name: pepSY
Funciton: iron-regulated membrane protein
Locus tag: ATW7_00900
Name: ATW7_00900
Funciton: iron uptake protein
ATW7_00890
ATW7_00890
iron uptake protein
ATW7_00895
pepSY
iron-regulated membrane protein
ATW7_00900
ATW7_00900
iron uptake protein
Position: -59
Score: 4.6
Sequence: TTTTGCAAATAATAATCATTA
Position: -53
Score: 5.6
Sequence: AAATAATAATCATTACCATTA
Position: -20
Score: 5.4
Sequence: AAATGCGAATGGTTATCATAA
Locus tag: ATW7_00380
Name: COG4774
Funciton: Outer membrane receptor for monomeric catechols, TonB-dependent
ATW7_00380
COG4774
Outer membrane receptor for monomeric catechols, TonB-dependent
Position: -89
Score: 4.8
Sequence: AAATAATAACAACTATTAATA
Locus tag: ATW7_05436
Name: null
Funciton: putative orphan protein; putative conserved domain
ATW7_05436
putative orphan protein; putative conserved domain
Position: -68
Score: 6.2
Sequence: AAATGATATTGATTATCATTT
Locus tag: ATW7_13233
Name: PF11449
Funciton: Predicted manganese transporter, 11 TMS
ATW7_13233
PF11449
Predicted manganese transporter, 11 TMS
Position: -116
Score: 6
Sequence: TAATGATAACTATTATCATTA
Locus tag: ATW7_16530
Name: null
Funciton: hypothetical protein
Locus tag: ATW7_16525
Name: fumC
Funciton: Fumarate hydratase class II (EC 4.2.1.2)
ATW7_16530
hypothetical protein
ATW7_16525
fumC
Fumarate hydratase class II (EC 4.2.1.2)
Position: -51
Score: 5.4
Sequence: AAATAACAATTGATATCATTT
Locus tag: ATW7_15829
Name: pepSY
Funciton: putative iron-regulated membrane protein
ATW7_15829
pepSY
putative iron-regulated membrane protein
Position: -54
Score: 5.5
Sequence: TAATGATAGTCGTTATCATTT
Locus tag: ATW7_09161
Name: Patl_1142
Funciton: TonB-dependent siderophore receptor
ATW7_09161
Patl_1142
TonB-dependent siderophore receptor
Position: -66
Score: 5.2
Sequence: TATTGATAACTATTACTATTT
Locus tag: ATW7_02487
Name: bfd
Funciton: Bacterioferritin-associated ferredoxin
ATW7_02487
bfd
Bacterioferritin-associated ferredoxin
Position: -67
Score: 5.7
Sequence: AAATGATATTTATTTTTATTA
Locus tag: ATW7_15529
Name: CPS_4959
Funciton: Ferrichrome-iron receptor
ATW7_15529
CPS_4959
Ferrichrome-iron receptor
Position: -48
Score: 5.3
Sequence: TAATGCAAATCATTATCATGT
Locus tag: ATW7_15879
Name: CPS_1855
Funciton: conserved protein of unknown function; putative membrane-associated protein
Locus tag: ATW7_15884
Name: CPS_1856
Funciton: putative exported protein
Locus tag: ATW7_15889
Name: ATW7_15889
Funciton: Uncharacterized metal-binding protein
ATW7_15879
CPS_1855
conserved protein of unknown function; putative membrane-associated protein
ATW7_15884
CPS_1856
putative exported protein
ATW7_15889
ATW7_15889
Uncharacterized metal-binding protein
Position: -48
Score: 5
Sequence: ATATGATAATGTCTATCATTT
Locus tag: ATW7_13138
Name: null
Funciton: putative orphan protein
Locus tag: ATW7_13143
Name: fbpA
Funciton: Ferric iron ABC transporter, iron-binding protein
Locus tag: ATW7_13148
Name: fbpB
Funciton: Ferric iron ABC transporter, permease protein
Locus tag: ATW7_13153
Name: fbpC
Funciton: Ferric iron ABC transporter, ATP-binding protein
ATW7_13138
putative orphan protein
ATW7_13143
fbpA
Ferric iron ABC transporter, iron-binding protein
ATW7_13148
fbpB
Ferric iron ABC transporter, permease protein
ATW7_13153
fbpC
Ferric iron ABC transporter, ATP-binding protein
Position: -31
Score: 5.4
Sequence: TATTGATAATAATTACTATTT
Locus tag: ATW7_12358
Name: fbpA
Funciton: Ferric iron ABC transporter, iron-binding protein
Locus tag: ATW7_12353
Name: fbpB
Funciton: Ferric iron ABC transporter, permease protein
Locus tag: ATW7_12348
Name: fbpC
Funciton: Ferric iron ABC transporter, ATP-binding protein
Locus tag: ATW7_12343
Name: yfeK
Funciton: Predicted iron-dependent peroxidase, Dyp-type family
ATW7_12358
fbpA
Ferric iron ABC transporter, iron-binding protein
ATW7_12353
fbpB
Ferric iron ABC transporter, permease protein
ATW7_12348
fbpC
Ferric iron ABC transporter, ATP-binding protein
ATW7_12343
yfeK
Predicted iron-dependent peroxidase, Dyp-type family
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