Regulon of NtrC in Burkholderia cepacia AMMD

Properties
Regulator type:	Transcription factor
TF locus tag:	Bamb_2184
Regulator family:	Fis
Regulation mode:	activator (repressor)
Biological process:	Nitrogen assimilation
Effector:	Phosphorylated NtrB, signal histidine kinase
Regulog:	NtrC - Burkholderia
Statistics of regulated genes:
- Genes	8
- Operons	3
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 27 sites [see more]

Member of regulog collections

By taxonomy - Burkholderia
By trascription factor - NtrC
By TF family - Fis
By effector - Phosphorylated NtrB, signal histidine kinase
By pathway - Nitrogen assimilation

Regulated operons
	Locus Tag	Name	Function
Position: -255 Score: 4.6 Sequence: CGCGCCAGACCGGTGCA Locus tag: Bamb_1085 Name: amtB Funciton: Ammonia permease
	Bamb_1085	amtB	Ammonia permease
Position: -309 Score: 4 Sequence: CGCACGGCGACAGTGCT Position: -288 Score: 4.1 Sequence: CGCACCACATCTGTGCC Locus tag: Bamb_3937 Name: narK Funciton: Nitrate/nitrite antiporter Locus tag: Bamb_3936 Name: nasD Funciton: Nitrite reductase, large subunit (EC 1.7.1.4) Locus tag: Bamb_3935 Name: nasE Funciton: Nitrite reductase, small subunit (EC 1.7.1.4) Locus tag: Bamb_3934 Name: nasBA Funciton: Assimilatory nitrate reductase, large and small subunits protein fusion (EC:1.7.99.4)
	Bamb_3937	narK	Nitrate/nitrite antiporter
	Bamb_3936	nasD	Nitrite reductase, large subunit (EC 1.7.1.4)
	Bamb_3935	nasE	Nitrite reductase, small subunit (EC 1.7.1.4)
	Bamb_3934	nasBA	Assimilatory nitrate reductase, large and small subunits protein fusion (EC:1.7.99.4)
Position: -242 Score: 5.1 Sequence: TGCACCATTTCAGTGCG Locus tag: Bamb_2186 Name: glnA Funciton: Glutamine synthetase type I (EC 6.3.1.2) Locus tag: Bamb_2185 Name: ntrB Funciton: Nitrogen regulation protein NR(II) (EC 2.7.3.-) Locus tag: Bamb_2184 Name: ntrC Funciton: Nitrogen regulation protein NR(I), Fis family
	Bamb_2186	glnA	Glutamine synthetase type I (EC 6.3.1.2)
	Bamb_2185	ntrB	Nitrogen regulation protein NR(II) (EC 2.7.3.-)
	Bamb_2184	ntrC	Nitrogen regulation protein NR(I), Fis family

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD