Regulon of NtrC in Psychrobacter sp. PRwf-1
| Regulator type: | Transcription factor |
| TF locus tag: | PsycPRwf_1805 |
| Regulator family: | Fis |
| Regulation mode: | activator (repressor) |
| Biological process: | Nitrogen assimilation |
| Effector: | Phosphorylated NtrB, signal histidine kinase |
| Regulog: | NtrC - Moraxellaceae |
| Statistics of regulated genes: | |
| - Genes | 4 |
| - Operons | 3 |
| Visualization: | |
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Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Moraxellaceae
- By trascription factor - NtrC
- By TF family - Fis
- By effector - Phosphorylated NtrB, signal histidine kinase
- By pathway - Nitrogen assimilation
| Locus Tag | Name | Function | |
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Position: -447
Score: 4.8 Sequence: TGCACAATATTGGTGCG
Position: -414
Score: 4.2 Sequence: TGCCCTAATTTGGTTTA
Locus tag: PsycPRwf_1645
Name: glnA Funciton: Glutamine synthetase type I (EC 6.3.1.2) |
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glnA
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Glutamine synthetase type I (EC 6.3.1.2)
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Position: -168
Score: 4.8 Sequence: TGCACTAAAATAAATCA
Position: -137
Score: 4.7 Sequence: TGCACTATTTATGAGCA
Position: -93
Score: 4.6 Sequence: TGAGCCAATTTGGCGCA
Locus tag: PsycPRwf_1804
Name: ntrB Funciton: Nitrogen regulation protein ntrB (EC 2.7.3.-)
Locus tag: PsycPRwf_1805
Name: ntrC Funciton: Nitrogen regulation protein NR(I) |
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ntrB
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Nitrogen regulation protein ntrB (EC 2.7.3.-)
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ntrC
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Nitrogen regulation protein NR(I)
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Position: -282
Score: 4.6 Sequence: TGATTCATTATTAAGCA
Locus tag: PsycPRwf_1792
Name: COG0733 Funciton: Predicted sodium dependent transporter |
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COG0733
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Predicted sodium dependent transporter
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |