Regulon of NtrC in Ralstonia eutropha H16

Properties
Regulator type:	Transcription factor
TF locus tag:	H16_A2332
Regulator family:	Fis
Regulation mode:	activator (repressor)
Biological process:	Nitrogen assimilation
Effector:	Phosphorylated NtrB, signal histidine kinase
Regulog:	NtrC - Ralstonia
Statistics of regulated genes:
- Genes	10
- Operons	4
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 28 sites [see more]

Member of regulog collections

By taxonomy - Ralstonia
By trascription factor - NtrC
By TF family - Fis
By effector - Phosphorylated NtrB, signal histidine kinase
By pathway - Nitrogen assimilation

Regulated operons
	Locus Tag	Name	Function
Position: -95 Score: 4.7 Sequence: TGCACCAGAAAGGGGCG Locus tag: H16_A2334 Name: ntrZ Funciton: Conserved hypothetical signal peptide protein Locus tag: H16_A2333 Name: ntrB Funciton: Nitrogen regulation protein NR(II) (EC 2.7.3.-) Locus tag: H16_A2332 Name: ntrC Funciton: Nitrogen regulation protein NR(I), Fis family
	H16_A2334	ntrZ	Conserved hypothetical signal peptide protein
	H16_A2333	ntrB	Nitrogen regulation protein NR(II) (EC 2.7.3.-)
	H16_A2332	ntrC	Nitrogen regulation protein NR(I), Fis family
Position: -221 Score: 5.1 Sequence: CGCACCATAACGGTTCA Position: -188 Score: 4.9 Sequence: CGCGCCATTTTGGCGCA Locus tag: H16_B1234 Name: amtB Funciton: Ammonium transporter
	H16_B1234	amtB	Ammonium transporter
Position: -295 Score: 4.7 Sequence: TGCACCATTGTGGTGTT Locus tag: H16_A2335 Name: glnA Funciton: Glutamine synthetase type I (EC 6.3.1.2)
	H16_A2335	glnA	Glutamine synthetase type I (EC 6.3.1.2)
Position: -93 Score: 4.7 Sequence: CGCACCAAAACGCAGCG Locus tag: H16_A3298 Name: dppA Funciton: Dipeptide ABC transporter, substrate-binding component Locus tag: H16_A3297 Name: dppB Funciton: Dipeptide ABC transporter, permease component 1 Locus tag: H16_A3296 Name: dppC Funciton: Dipeptide ABC transporter, permease component 2 Locus tag: H16_A3295 Name: dppD Funciton: Dipeptide ABC transporter, ATP-binding component 1 Locus tag: H16_A3294 Name: dppF Funciton: Dipeptide ABC transporter, ATP-binding component 2
	H16_A3298	dppA	Dipeptide ABC transporter, substrate-binding component
	H16_A3297	dppB	Dipeptide ABC transporter, permease component 1
	H16_A3296	dppC	Dipeptide ABC transporter, permease component 2
	H16_A3295	dppD	Dipeptide ABC transporter, ATP-binding component 1
	H16_A3294	dppF	Dipeptide ABC transporter, ATP-binding component 2

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD