Regulon of NtrC in Ralstonia metallidurans CH34

Properties
Regulator type:	Transcription factor
TF locus tag:	Rmet_2059
Regulator family:	Fis
Regulation mode:	activator (repressor)
Biological process:	Nitrogen assimilation
Effector:	Phosphorylated NtrB, signal histidine kinase
Regulog:	NtrC - Ralstonia
Statistics of regulated genes:
- Genes	15
- Operons	5
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 28 sites [see more]

Member of regulog collections

By taxonomy - Ralstonia
By trascription factor - NtrC
By TF family - Fis
By effector - Phosphorylated NtrB, signal histidine kinase
By pathway - Nitrogen assimilation

Regulated operons
	Locus Tag	Name	Function
Position: -193 Score: 4.4 Sequence: TGCACCAGGAAGGGGCG Locus tag: Rmet_2061 Name: ntrZ Funciton: Conserved hypothetical signal peptide protein Locus tag: Rmet_2060 Name: ntrB Funciton: Nitrogen regulation protein NR(II) (EC 2.7.3.-) Locus tag: Rmet_2059 Name: ntrC Funciton: Nitrogen regulation protein NR(I), Fis family
	Rmet_2061	ntrZ	Conserved hypothetical signal peptide protein
	Rmet_2060	ntrB	Nitrogen regulation protein NR(II) (EC 2.7.3.-)
	Rmet_2059	ntrC	Nitrogen regulation protein NR(I), Fis family
Position: -185 Score: 4.5 Sequence: TGCGCCATCACGGCGCA Locus tag: Rmet_4750 Name: amtB Funciton: Ammonium transporter
	Rmet_4750	amtB	Ammonium transporter
Position: -297 Score: 4.9 Sequence: CGCACCGTTATGGTGTT Locus tag: Rmet_2062 Name: glnA Funciton: Glutamine synthetase type I (EC 6.3.1.2)
	Rmet_2062	glnA	Glutamine synthetase type I (EC 6.3.1.2)
Position: -284 Score: 5 Sequence: CGCACCATTGCCGTGCG Locus tag: Rmet_4817 Name: narK Funciton: Nitrate/nitrite antiporter Locus tag: Rmet_4818 Name: nasD Funciton: Nitrite reductase, large subunit (EC 1.7.1.4) Locus tag: Rmet_4819 Name: nasE Funciton: Nitrite reductase, small subunit (EC 1.7.1.4) Locus tag: Rmet_4820 Name: nasB Funciton: Assimilatory nitrate reductase, small subunit (EC:1.7.99.4) Locus tag: Rmet_4821 Name: nasA Funciton: Assimilatory nitrate reductase, large subunit (EC:1.7.99.4)
	Rmet_4817	narK	Nitrate/nitrite antiporter
	Rmet_4818	nasD	Nitrite reductase, large subunit (EC 1.7.1.4)
	Rmet_4819	nasE	Nitrite reductase, small subunit (EC 1.7.1.4)
	Rmet_4820	nasB	Assimilatory nitrate reductase, small subunit (EC:1.7.99.4)
	Rmet_4821	nasA	Assimilatory nitrate reductase, large subunit (EC:1.7.99.4)
Position: -218 Score: 4.5 Sequence: CGCAGCATTGCGGGGCA Position: -91 Score: 4.3 Sequence: CGCACCAAAATGCGGCC Locus tag: Rmet_3158 Name: dppA Funciton: Dipeptide ABC transporter, substrate-binding component Locus tag: Rmet_3157 Name: dppB Funciton: Dipeptide ABC transporter, permease component 1 Locus tag: Rmet_3156 Name: dppC Funciton: Dipeptide ABC transporter, permease component 2 Locus tag: Rmet_3155 Name: dppD Funciton: Dipeptide ABC transporter, ATP-binding component 1 Locus tag: Rmet_3154 Name: dppF Funciton: Dipeptide ABC transporter, ATP-binding component 2
	Rmet_3158	dppA	Dipeptide ABC transporter, substrate-binding component
	Rmet_3157	dppB	Dipeptide ABC transporter, permease component 1
	Rmet_3156	dppC	Dipeptide ABC transporter, permease component 2
	Rmet_3155	dppD	Dipeptide ABC transporter, ATP-binding component 1
	Rmet_3154	dppF	Dipeptide ABC transporter, ATP-binding component 2

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Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --

Regulon of NtrC in Ralstonia metallidurans CH34

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --