Regulon of NtrC in Ralstonia pickettii 12J

Properties
Regulator type:	Transcription factor
TF locus tag:	Rpic_1089
Regulator family:	Fis
Regulation mode:	activator (repressor)
Biological process:	Nitrogen assimilation
Effector:	Phosphorylated NtrB, signal histidine kinase
Regulog:	NtrC - Ralstonia
Statistics of regulated genes:
- Genes	10
- Operons	3
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 28 sites [see more]

Member of regulog collections

By taxonomy - Ralstonia
By trascription factor - NtrC
By TF family - Fis
By effector - Phosphorylated NtrB, signal histidine kinase
By pathway - Nitrogen assimilation

Regulated operons
	Locus Tag	Name	Function
Position: -272 Score: 4.4 Sequence: TGCACCGAAAGCGTGCG Locus tag: Rpic_4163 Name: narK Funciton: Nitrate/nitrite antiporter Locus tag: Rpic_4164 Name: nasD Funciton: Nitrite reductase, large subunit (EC 1.7.1.4) Locus tag: Rpic_4165 Name: nasE Funciton: Nitrite reductase, small subunit (EC 1.7.1.4) Locus tag: Rpic_4166 Name: nasB Funciton: Assimilatory nitrate reductase, small subunit (EC:1.7.99.4) Locus tag: Rpic_4167 Name: nasA Funciton: Assimilatory nitrate reductase, large subunit (EC:1.7.99.4)
	Rpic_4163	narK	Nitrate/nitrite antiporter
	Rpic_4164	nasD	Nitrite reductase, large subunit (EC 1.7.1.4)
	Rpic_4165	nasE	Nitrite reductase, small subunit (EC 1.7.1.4)
	Rpic_4166	nasB	Assimilatory nitrate reductase, small subunit (EC:1.7.99.4)
	Rpic_4167	nasA	Assimilatory nitrate reductase, large subunit (EC:1.7.99.4)
Position: -346 Score: 4.7 Sequence: TGCACCGTTTATGTGCG Locus tag: Rpic_1086 Name: glnA Funciton: Glutamine synthetase type I (EC 6.3.1.2) Locus tag: Rpic_1087 Name: ntrZ Funciton: Conserved hypothetical signal peptide protein Locus tag: Rpic_1088 Name: ntrB Funciton: Nitrogen regulation protein NR(II) (EC 2.7.3.-) Locus tag: Rpic_1089 Name: ntrC Funciton: Nitrogen regulation protein NR(I), Fis family
	Rpic_1086	glnA	Glutamine synthetase type I (EC 6.3.1.2)
	Rpic_1087	ntrZ	Conserved hypothetical signal peptide protein
	Rpic_1088	ntrB	Nitrogen regulation protein NR(II) (EC 2.7.3.-)
	Rpic_1089	ntrC	Nitrogen regulation protein NR(I), Fis family
Position: -137 Score: 4.9 Sequence: CGCACGACCATGGTGCG Locus tag: Rpic_0087 Name: amtB Funciton: Ammonium transporter
	Rpic_0087	amtB	Ammonium transporter

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD