Regulon of NtrC in Ralstonia solanacearum GMI1000

Properties
Regulator type:	Transcription factor
TF locus tag:	RSc1261
Regulator family:	Fis
Regulation mode:	activator (repressor)
Biological process:	Nitrogen assimilation
Effector:	Phosphorylated NtrB, signal histidine kinase
Regulog:	NtrC - Ralstonia
Statistics of regulated genes:
- Genes	14
- Operons	3
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 28 sites [see more]

Member of regulog collections

By taxonomy - Ralstonia
By trascription factor - NtrC
By TF family - Fis
By effector - Phosphorylated NtrB, signal histidine kinase
By pathway - Nitrogen assimilation

Regulated operons
	Locus Tag	Name	Function
Position: -258 Score: 4.8 Sequence: TGCACCGAAACCGTGCA Locus tag: RS03167 Name: narK Funciton: Nitrate/nitrite antiporter Locus tag: RSp1222 Name: nasD Funciton: Nitrite reductase, large subunit (EC 1.7.1.4) Locus tag: RSp1221 Name: nasE Funciton: Nitrite reductase, small subunit (EC 1.7.1.4) Locus tag: RS03164 Name: nasB Funciton: Assimilatory nitrate reductase, small subunit (EC:1.7.99.4) Locus tag: RSp1219 Name: nasA Funciton: Assimilatory nitrate reductase, large subunit (EC:1.7.99.4)
	RS03167	narK	Nitrate/nitrite antiporter
	RSp1222	nasD	Nitrite reductase, large subunit (EC 1.7.1.4)
	RSp1221	nasE	Nitrite reductase, small subunit (EC 1.7.1.4)
	RS03164	nasB	Assimilatory nitrate reductase, small subunit (EC:1.7.99.4)
	RSp1219	nasA	Assimilatory nitrate reductase, large subunit (EC:1.7.99.4)
Position: -334 Score: 5.1 Sequence: CGCACTATGATGGTGCG Locus tag: RSc1258 Name: glnA Funciton: Glutamine synthetase type I (EC 6.3.1.2) Locus tag: RS02776 Name: ntrZ Funciton: Conserved hypothetical signal peptide protein Locus tag: RSc1260 Name: ntrB Funciton: Nitrogen regulation protein NR(II) (EC 2.7.3.-) Locus tag: RSc1261 Name: ntrC Funciton: Nitrogen regulation protein NR(I), Fis family
	RSc1258	glnA	Glutamine synthetase type I (EC 6.3.1.2)
	RS02776	ntrZ	Conserved hypothetical signal peptide protein
	RSc1260	ntrB	Nitrogen regulation protein NR(II) (EC 2.7.3.-)
	RSc1261	ntrC	Nitrogen regulation protein NR(I), Fis family
Position: -193 Score: 4.6 Sequence: TGCACCAATTTGTGGCG Locus tag: RSc2870 Name: dppA Funciton: Dipeptide ABC transporter, substrate-binding component Locus tag: RSc2869 Name: dppB Funciton: Dipeptide ABC transporter, permease component 1 Locus tag: RSc2868 Name: dppC Funciton: Dipeptide ABC transporter, permease component 2 Locus tag: RSc2867 Name: dppD Funciton: Dipeptide ABC transporter, ATP-binding component 1 Locus tag: RSc2866 Name: dppF Funciton: Dipeptide ABC transporter, ATP-binding component 2
	RSc2870	dppA	Dipeptide ABC transporter, substrate-binding component
	RSc2869	dppB	Dipeptide ABC transporter, permease component 1
	RSc2868	dppC	Dipeptide ABC transporter, permease component 2
	RSc2867	dppD	Dipeptide ABC transporter, ATP-binding component 1
	RSc2866	dppF	Dipeptide ABC transporter, ATP-binding component 2

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD