Regulon of SiaR in Haemophilus somnus 2336

Properties
Regulator type:	Transcription factor
TF locus tag:	HSM_1107
Regulator family:	RpiR
Regulation mode:	repressor (activator)
Biological process:	Sialic acid utilization
Effector:	Glucosamine-6-phosphate
Regulog:	SiaR - Pasteurellales
Statistics of regulated genes:
- Genes	10
- Operons	3
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 23 sites [see more]

Member of regulog collections

By taxonomy - Pasteurellales
By trascription factor - SiaR
By TF family - RpiR
By effector - Glucosamine-6-phosphate
By pathway - Sialic acid utilization

Regulated operons
	Locus Tag	Name	Function
Position: -56 Score: 5.2 Sequence: TCTGAAATAAAACTTCATT Locus tag: HSM_1505 Name: nagB Funciton: Glucosamine-6-phosphate deaminase (EC 3.5.99.6) Locus tag: HSM_1504 Name: nagA Funciton: N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25)
	HSM_1505	nagB	Glucosamine-6-phosphate deaminase (EC 3.5.99.6)
	HSM_1504	nagA	N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25)
Position: -156 Score: 4.1 Sequence: TTTGGTGTTTTACTCCAGA Position: -106 Score: 4.4 Sequence: TCTGAAATAAAACTCTATA Locus tag: HSM_1112 Name: siaP Funciton: Sialic acid-binding periplasmic protein SiaP (N-acetylneuraminic-binding protein) (Neu5Ac-binding protein)(Extracytoplasmic solute receptor protein siaP) Locus tag: HSM_1113 Name: siaT Funciton: TRAP-type transport system, large permease component, N-acetylneuraminate transporter / TRAP-type transport system, small permease component, N-acetylneuraminate transporter
	HSM_1112	siaP	Sialic acid-binding periplasmic protein SiaP (N-acetylneuraminic-binding protein) (Neu5Ac-binding protein)(Extracytoplasmic solute receptor protein siaP)
	HSM_1113	siaT	TRAP-type transport system, large permease component, N-acetylneuraminate transporter / TRAP-type transport system, small permease component, N-acetylneuraminate transporter
Position: -145 Score: 4.4 Sequence: TATAGAGTTTTATTTCAGA Position: -95 Score: 4.1 Sequence: TCTGGAGTAAAACACCAAA Locus tag: HSM_1111 Name: neuA Funciton: Putative N-acylneuraminate cytidylyltransferase (EC 2.7.7.43) Locus tag: HSM_1110 Name: nanE Funciton: N-acetylmannosamine-6-phosphate 2-epimerase (EC 5.1.3.9) Locus tag: HSM_1109 Name: nanK Funciton: N-acetylmannosamine kinase (EC 2.7.1.60) Locus tag: HSM_1108 Name: yhcH Funciton: Uncharacterized protein yhcH Locus tag: HSM_1107 Name: siaR Funciton: Sialic acid utilization regulator, RpiR family Locus tag: HSM_1106 Name: nanA Funciton: N-acetylneuraminate lyase (EC 4.1.3.3)
	HSM_1111	neuA	Putative N-acylneuraminate cytidylyltransferase (EC 2.7.7.43)
	HSM_1110	nanE	N-acetylmannosamine-6-phosphate 2-epimerase (EC 5.1.3.9)
	HSM_1109	nanK	N-acetylmannosamine kinase (EC 2.7.1.60)
	HSM_1108	yhcH	Uncharacterized protein yhcH
	HSM_1107	siaR	Sialic acid utilization regulator, RpiR family
	HSM_1106	nanA	N-acetylneuraminate lyase (EC 4.1.3.3)

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD