Regulon of NagQ in Agrobacterium tumefaciens str. C58 (Cereon)
| Regulator type: | Transcription factor |
| TF locus tag: | Atu2606 |
| Regulator family: | GntR/Others |
| Regulation mode: | repressor |
| Biological process: | N-acetylglucosamine utilization |
| Effector: | N-acetylglucosamine |
| Regulog: | NagQ - Rhizobiales |
| Statistics of regulated genes: | |
| - Genes | 9 |
| - Operons | 2 |
| Visualization: | |
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Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By trascription factor - NagQ
- By taxonomy - Rhizobiales
- By TF family - GntR/Others
- By effector - N-acetylglucosamine
- By pathway - N-acetylglucosamine utilization
| Locus Tag | Name | Function | |
|---|---|---|---|
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Position: -233
Score: -2 Sequence: GATGCCAAAACAATACCA
Position: -222
Score: -1.5 Sequence: AATACCAAAAAAATGCCA
Locus tag: Atu2606
Name: nagQ Funciton: Transcriptional regulator of N-Acetylglucosamine utilization, GntR family
Locus tag: Atu2607
Name: nagB2 Funciton: Glucosamine-6-phosphate deaminase [isomerizing], alternative (EC 3.5.99.6)
Locus tag: Atu2608
Name: nagA Funciton: N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25)
Locus tag: Atu2609
Name: nagK2 Funciton: N-acetylglucosamine kinase (EC 2.7.1.59), ROK family |
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nagQ
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Transcriptional regulator of N-Acetylglucosamine utilization, GntR family
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nagB2
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Glucosamine-6-phosphate deaminase [isomerizing], alternative (EC 3.5.99.6)
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nagA
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N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25)
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nagK2
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N-acetylglucosamine kinase (EC 2.7.1.59), ROK family
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Position: -236
Score: 6.1 Sequence: TGGCATTTTTTTGGTATT
Position: -225
Score: 6.1 Sequence: TGGTATTGTTTTGGCATC
Locus tag: Atu2604
Name: nagD1 Funciton: Probable oxidoreductase
Locus tag: Atu2603
Name: nagM Funciton: Predicted N-Acetylglucosamine ABC transporter, inner membrane subunit
Locus tag: Atu2602
Name: nagN Funciton: Predicted N-Acetylglucosamine ABC transporter, permease protein
Locus tag: Atu2601
Name: nagO Funciton: Predicted N-Acetylglucosamine ABC transporter, periplasmic sugar-binding protein
Locus tag: Atu2600
Name: nagL Funciton: Predicted N-Acetylglucosamine ABC transporter, ATP-binding protein |
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nagD1
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Probable oxidoreductase
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nagM
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Predicted N-Acetylglucosamine ABC transporter, inner membrane subunit
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nagN
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Predicted N-Acetylglucosamine ABC transporter, permease protein
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nagO
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Predicted N-Acetylglucosamine ABC transporter, periplasmic sugar-binding protein
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nagL
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Predicted N-Acetylglucosamine ABC transporter, ATP-binding protein
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |