Regulog NagQ - Rhizobiales
| Regulator type: | Transcription factor |
| Regulator family: | GntR/Others |
| Regulation mode: | repressor |
| Biological process: | N-acetylglucosamine utilization |
| Effector: | N-acetylglucosamine |
| Phylum: | Proteobacteria/alpha |
| Visualization: | |
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Allows to visualize regulog content in the context of metabolic pathways |
Member of regulog collections
- By trascription factor - NagQ
- By taxonomy - Rhizobiales
- By TF family - GntR/Others
- By effector - N-acetylglucosamine
- By pathway - N-acetylglucosamine utilization
| Genome | Genes | Operons |
|---|---|---|
| Sinorhizobium meliloti 1021 | 10 | 2 |
| Rhizobium sp. NGR234 | 10 | 2 |
| Rhizobium leguminosarum bv. viciae 3841 | 2 | 1 |
| Rhizobium etli CFN 42 | 2 | 1 |
| Agrobacterium tumefaciens str. C58 (Cereon) | 9 | 2 |
| Mesorhizobium sp. BNC1 | ||
| Mesorhizobium loti MAFF303099 | 11 | 2 |
| Brucella melitensis 16M | 8 | 2 |
| Bartonella quintana str. Toulouse | ||
| Rhodopseudomonas palustris CGA009 | ||
| Bradyrhizobium japonicum USDA 110 | ||
| Bradyrhizobium sp. BTAi1 | ||
| Nitrobacter winogradskyi Nb-255 | ||
| Azorhizobium caulinodans ORS 571 | ||
| Xanthobacter autotrophicus Py2 |
| Genes | Function | |||||||||||||||
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| CRON 1. | ||||||||||||||||
| nagK |
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Sinorhizobium meliloti 1021 Site: position = -174 score = -1.47703 sequence = AATGCCAAAAAAATACCA Gene: SMc02875: N-acetylglucosamine kinase of eukaryotic type (EC 2.7.1.59) |
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Rhizobium sp. NGR234 Site: position = -172 score = -1.47703 sequence = AATGCCAAAAAAATACCA Gene: NGR_c35310: N-acetylglucosamine kinase of eukaryotic type (EC 2.7.1.59) |
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Rhizobium leguminosarum bv. viciae 3841 Site: position = -187 score = -1.47703 sequence = AATGCCAAAAAAATACCA Gene: RL3360: N-acetylglucosamine kinase of eukaryotic type (EC 2.7.1.59) |
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Rhizobium etli CFN 42 Site: position = -186 score = -0.877893 sequence = AAGGCCAAAAAAATACCA Gene: RHE_CH02899: N-acetylglucosamine kinase of eukaryotic type (EC 2.7.1.59) |
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Gene: Meso_2705: N-acetylglucosamine kinase of eukaryotic type (EC 2.7.1.59) |
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Mesorhizobium loti MAFF303099 Site: position = -186 score = -1.80833 sequence = AATACCAGAACAATACCA Site: position = -175 score = -1.47703 sequence = AATACCAAAAAAATACCA Gene: mll4769: N-acetylglucosamine kinase of eukaryotic type (EC 2.7.1.59) |
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Brucella melitensis 16M Site: position = -132 score = -1.14953 sequence = AATGCCAAAAACGCACCA Gene: BMEII0756: N-acetylglucosamine kinase of eukaryotic type (EC 2.7.1.59) |
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N-acetylglucosamine kinase of eukaryotic type (EC 2.7.1.59) |
| nagQ |
Gene: SMc02876: Transcriptional regulator of N-Acetylglucosamine utilization, GntR family |
Gene: NGR_c35320: Transcriptional regulator of N-Acetylglucosamine utilization, GntR family |
Gene: RL3361: Transcriptional regulator of N-Acetylglucosamine utilization, GntR family |
Gene: RHE_CH02900: Transcriptional regulator of N-Acetylglucosamine utilization, GntR family |
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Agrobacterium tumefaciens str. C58 (Cereon) Site: position = -233 score = -1.99069 sequence = GATGCCAAAACAATACCA Site: position = -222 score = -1.47703 sequence = AATACCAAAAAAATGCCA Gene: Atu2606: Transcriptional regulator of N-Acetylglucosamine utilization, GntR family |
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Gene: mll4768: Transcriptional regulator of N-Acetylglucosamine utilization, GntR family |
Gene: BMEII0757: Transcriptional regulator of N-Acetylglucosamine utilization, GntR family |
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Transcriptional regulator of N-Acetylglucosamine utilization, GntR family |
| nagB2 |
Gene: SMc02877: Glucosamine-6-phosphate deaminase [isomerizing], alternative (EC 3.5.99.6) |
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Rhizobium sp. NGR234 Gene: NGR_b01210: Glucosamine-6-phosphate deaminase [isomerizing], alternative (EC 3.5.99.6) Gene: NGR_c35330: Glucosamine-6-phosphate deaminase [isomerizing], alternative (EC 3.5.99.6) |
Gene: RL4603: Glucosamine-6-phosphate deaminase [isomerizing], alternative (EC 3.5.99.6) |
Gene: RHE_CH04036: Glucosamine-6-phosphate deaminase [isomerizing], alternative (EC 3.5.99.6) |
Gene: Atu2607: Glucosamine-6-phosphate deaminase [isomerizing], alternative (EC 3.5.99.6) |
Gene: Meso_2864: Glucosamine-6-phosphate deaminase [isomerizing], alternative (EC 3.5.99.6) |
Gene: mll4767: Glucosamine-6-phosphate deaminase [isomerizing], alternative (EC 3.5.99.6) |
Gene: BMEII0384: Glucosamine-6-phosphate deaminase [isomerizing], alternative (EC 3.5.99.6) |
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Glucosamine-6-phosphate deaminase [isomerizing], alternative (EC 3.5.99.6) |
| nagA |
Gene: SMc02878: N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25) |
Gene: NGR_c35340: N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25) |
Gene: RL4602: N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25) |
Gene: RHE_CH04037: N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25) |
Gene: Atu2608: N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25) |
Gene: Meso_2863: N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25) |
Gene: mll4766: N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25) |
Gene: BMEII0385: N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25) |
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N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25) |
| nagK2 |
Gene: SMc02880: N-acetylglucosamine kinase (EC 2.7.1.59), ROK family |
Gene: NGR_c35360: N-acetylglucosamine kinase (EC 2.7.1.59), ROK family |
Gene: RL4221: N-acetylglucosamine kinase (EC 2.7.1.59), ROK family |
Gene: RHE_CH03685: N-acetylglucosamine kinase (EC 2.7.1.59), ROK family |
Gene: Atu2609: N-acetylglucosamine kinase (EC 2.7.1.59), ROK family |
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N-acetylglucosamine kinase (EC 2.7.1.59), ROK family |
| CRON 2. | ||||||||||||||||
| nagD1 |
Gene: SMb21148: Probable oxidoreductase |
Gene: NGR_b13070: Probable oxidoreductase |
Gene: pRL110485: Probable oxidoreductase |
Gene: RHE_PE00367: Probable oxidoreductase |
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Agrobacterium tumefaciens str. C58 (Cereon) Site: position = -236 score = 6.13731 sequence = TGGCATTTTTTTGGTATT Site: position = -225 score = 6.05241 sequence = TGGTATTGTTTTGGCATC Gene: Atu2604: Probable oxidoreductase |
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Probable oxidoreductase |
| nagM |
Gene: SMb21149: Predicted N-Acetylglucosamine ABC transporter, inner membrane subunit |
Gene: NGR_b13080: Predicted N-Acetylglucosamine ABC transporter, inner membrane subunit |
Gene: pRL110486: Predicted N-Acetylglucosamine ABC transporter, inner membrane subunit |
Gene: RHE_PE00368: Predicted N-Acetylglucosamine ABC transporter, inner membrane subunit |
Gene: Atu2603: Predicted N-Acetylglucosamine ABC transporter, inner membrane subunit |
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Gene: mll4147: Predicted N-Acetylglucosamine ABC transporter, inner membrane subunit |
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Predicted N-Acetylglucosamine ABC transporter, inner membrane subunit |
| nagN |
Gene: SMb21150: Predicted N-Acetylglucosamine ABC transporter, permease protein |
Gene: NGR_b13090: Predicted N-Acetylglucosamine ABC transporter, permease protein |
Gene: pRL110487: Predicted N-Acetylglucosamine ABC transporter, permease protein |
Gene: RHE_PE00369: Predicted N-Acetylglucosamine ABC transporter, permease protein |
Gene: Atu2602: Predicted N-Acetylglucosamine ABC transporter, permease protein |
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Gene: mll4146: Predicted N-Acetylglucosamine ABC transporter, permease protein |
Gene: BMEII0541: Predicted N-Acetylglucosamine ABC transporter, permease protein |
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Predicted N-Acetylglucosamine ABC transporter, permease protein |
| nagO |
Gene: SMb21151: Predicted N-Acetylglucosamine ABC transporter, periplasmic sugar-binding protein |
Gene: NGR_b13100: Predicted N-Acetylglucosamine ABC transporter, periplasmic sugar-binding protein |
Gene: pRL110488: Predicted N-Acetylglucosamine ABC transporter, periplasmic sugar-binding protein |
Gene: RHE_PE00370: Predicted N-Acetylglucosamine ABC transporter, periplasmic sugar-binding protein |
Gene: Atu2601: Predicted N-Acetylglucosamine ABC transporter, periplasmic sugar-binding protein |
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Gene: mll4149: Predicted N-Acetylglucosamine ABC transporter, periplasmic sugar-binding protein |
Gene: BMEII0542: Predicted N-Acetylglucosamine ABC transporter, periplasmic sugar-binding protein |
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Predicted N-Acetylglucosamine ABC transporter, periplasmic sugar-binding protein |
| nagL |
Gene: SMb21152: Predicted N-Acetylglucosamine ABC transporter, ATP-binding protein |
Gene: NGR_b13110: Predicted N-Acetylglucosamine ABC transporter, ATP-binding protein |
Gene: pRL110489: Predicted N-Acetylglucosamine ABC transporter, ATP-binding protein |
Gene: RHE_PE00371: Predicted N-Acetylglucosamine ABC transporter, ATP-binding protein |
Gene: Atu2600: Predicted N-Acetylglucosamine ABC transporter, ATP-binding protein |
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Predicted N-Acetylglucosamine ABC transporter, ATP-binding protein |
| CRON 3. | ||||||||||||||||
| murQ |
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Sinorhizobium meliloti 1021 Site: position = -43 score = 6.31312 sequence = TGGTATTTTTTTGGCATT Gene: SMc02874: N-acetylmuramic acid 6-phosphate etherase (EC 4.2.-.-) |
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Rhizobium sp. NGR234 Site: position = -42 score = 6.31312 sequence = TGGTATTTTTTTGGCATT Gene: NGR_c35300: N-acetylmuramic acid 6-phosphate etherase (EC 4.2.-.-) |
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Gene: Meso_2865: N-acetylmuramic acid 6-phosphate etherase (EC 4.2.-.-) |
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Mesorhizobium loti MAFF303099 Site: position = -30 score = 5.9216 sequence = TGGTATTGTTCTGGTATT Site: position = -41 score = 6.54201 sequence = TGGTATTTTTTTGGTATT Gene: mlr4770: N-acetylmuramic acid 6-phosphate etherase (EC 4.2.-.-) |
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N-acetylmuramic acid 6-phosphate etherase (EC 4.2.-.-) |
| nagT |
Gene: SMc02873: N-Acetyl-D-glucosamine ABC transport system, sugar-binding protein |
Gene: NGR_c35290: N-Acetyl-D-glucosamine ABC transport system, sugar-binding protein |
Gene: RL3359: N-Acetyl-D-glucosamine ABC transport system, sugar-binding protein |
Gene: RHE_CH02898: N-Acetyl-D-glucosamine ABC transport system, sugar-binding protein |
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Gene: Meso_2706: N-Acetyl-D-glucosamine ABC transport system, sugar-binding protein |
Gene: mlr4771: N-Acetyl-D-glucosamine ABC transport system, sugar-binding protein |
*2
Brucella melitensis 16M Site: position = -219 score = 4.73431 sequence = TGGTGCGTTTTTGGCATT Gene: BMEII0755: N-Acetyl-D-glucosamine ABC transport system, sugar-binding protein Gene: BMEII0754: N-Acetyl-D-glucosamine ABC transport system, sugar-binding protein |
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N-Acetyl-D-glucosamine ABC transport system, sugar-binding protein |
| nagU |
Gene: SMc02872: N-Acetyl-D-glucosamine ABC transport system, permease protein 1 |
Gene: NGR_c35280: N-Acetyl-D-glucosamine ABC transport system, permease protein 1 |
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Rhizobium leguminosarum bv. viciae 3841 Gene: RL3358: N-Acetyl-D-glucosamine ABC transport system, permease protein 1 Gene: pRL120112: N-Acetyl-D-glucosamine ABC transport system, permease protein 1 |
Gene: RHE_CH02897: N-Acetyl-D-glucosamine ABC transport system, permease protein 1 |
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Mesorhizobium sp. BNC1 Gene: Meso_1095: N-Acetyl-D-glucosamine ABC transport system, permease protein 1 Gene: Meso_2707: N-Acetyl-D-glucosamine ABC transport system, permease protein 1 |
Gene: mlr4772: N-Acetyl-D-glucosamine ABC transport system, permease protein 1 |
Gene: BMEII0753: N-Acetyl-D-glucosamine ABC transport system, permease protein 1 |
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N-Acetyl-D-glucosamine ABC transport system, permease protein 1 |
| nagV |
Gene: SMc02871: N-Acetyl-D-glucosamine ABC transport system, permease protein 2 |
Gene: NGR_c35270: N-Acetyl-D-glucosamine ABC transport system, permease protein 2 |
Gene: RL3357: N-Acetyl-D-glucosamine ABC transport system, permease protein 2 |
Gene: RHE_CH02896: N-Acetyl-D-glucosamine ABC transport system, permease protein 2 |
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Gene: Meso_2708: N-Acetyl-D-glucosamine ABC transport system, permease protein 2 |
Gene: mlr4774: N-Acetyl-D-glucosamine ABC transport system, permease protein 2 |
Gene: BMEII0752: N-Acetyl-D-glucosamine ABC transport system, permease protein 2 |
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N-Acetyl-D-glucosamine ABC transport system, permease protein 2 |
| mlr4776 |
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Gene: mlr4776: Hypothetical protein |
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Hypothetical protein |
| nagD |
Gene: SMc02870: Hypothetical oxidoreductase related to N-acetylglucosamine utilization |
Gene: NGR_c35260: Hypothetical oxidoreductase related to N-acetylglucosamine utilization |
Gene: RL3356: Hypothetical oxidoreductase related to N-acetylglucosamine utilization |
Gene: RHE_CH02895: Hypothetical oxidoreductase related to N-acetylglucosamine utilization |
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Gene: Meso_2709: Hypothetical oxidoreductase related to N-acetylglucosamine utilization |
Gene: mlr4777: Hypothetical oxidoreductase related to N-acetylglucosamine utilization |
Gene: BMEII0751: Hypothetical oxidoreductase related to N-acetylglucosamine utilization |
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Hypothetical oxidoreductase related to N-acetylglucosamine utilization |
| nagW |
Gene: SMc02869: N-Acetyl-D-glucosamine ABC transport system ATP-binding protein |
Gene: NGR_c35250: N-Acetyl-D-glucosamine ABC transport system ATP-binding protein |
Gene: RL3355: N-Acetyl-D-glucosamine ABC transport system ATP-binding protein |
Gene: RHE_CH02894: N-Acetyl-D-glucosamine ABC transport system ATP-binding protein |
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Gene: Meso_2710: N-Acetyl-D-glucosamine ABC transport system ATP-binding protein |
Gene: mlr4779: N-Acetyl-D-glucosamine ABC transport system ATP-binding protein |
Gene: BMEII0750: N-Acetyl-D-glucosamine ABC transport system ATP-binding protein |
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N-Acetyl-D-glucosamine ABC transport system ATP-binding protein |
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |