Regulon of Irr in Silicibacter TM1040

Properties
Regulator type:	Transcription factor
TF locus tag:	TM1040_0183
Regulator family:	FUR
Regulation mode:	repressor
Biological process:	Iron homeostasis
Effector:	Heme
Regulog:	Irr - Rhodobacterales
Statistics of regulated genes:
- Genes	12
- Operons	3
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 37 sites [see more]

Member of regulog collections

By trascription factor - Irr
By taxonomy - Rhodobacterales
By TF family - FUR
By effector - Heme
By pathway - Iron homeostasis

Regulated operons
	Locus Tag	Name	Function
Position: -117 Score: 5.7 Sequence: ACCTTAGAACTGTTCTAAAGA Locus tag: TM1040_1240 Name: iscR Funciton: Iron-sulfur cluster regulator IscR Locus tag: TM1040_1241 Name: sufS Funciton: Cysteine desulfurase (EC 2.8.1.7) Locus tag: TM1040_1242 Name: sufB Funciton: Iron-sulfur assembly protein SufB Locus tag: TM1040_1243 Name: PF01906 Funciton: hypothetical protein Locus tag: TM1040_1244 Name: PF02475 Funciton: Methyltransferase FkbM Locus tag: TM1040_1245 Name: sufC Funciton: Iron-sulfur cluster assembly ATPase protein SufC Locus tag: TM1040_1246 Name: sufD Funciton: Iron-sulfur cluster assembly protein SufD Locus tag: TM1040_1247 Name: PF04893 Funciton: hypothetical protein Locus tag: TM1040_1248 Name: PF04893 Funciton: hypothetical protein Locus tag: TM1040_1249 Name: sufS2 Funciton: Cysteine desulfurase (EC 2.8.1.7), SufS subfamily
	TM1040_1240	iscR	Iron-sulfur cluster regulator IscR
	TM1040_1241	sufS	Cysteine desulfurase (EC 2.8.1.7)
	TM1040_1242	sufB	Iron-sulfur assembly protein SufB
	TM1040_1243	PF01906	hypothetical protein
	TM1040_1244	PF02475	Methyltransferase FkbM
	TM1040_1245	sufC	Iron-sulfur cluster assembly ATPase protein SufC
	TM1040_1246	sufD	Iron-sulfur cluster assembly protein SufD
	TM1040_1247	PF04893	hypothetical protein
	TM1040_1248	PF04893	hypothetical protein
	TM1040_1249	sufS2	Cysteine desulfurase (EC 2.8.1.7), SufS subfamily
Position: -74 Score: 5.7 Sequence: AATTTAGAACCATTCCAAAAC Locus tag: TM1040_3091 Name: fssA Funciton: putative nifU-like iron-sulphur cluster scaffold protein
	TM1040_3091	fssA	putative nifU-like iron-sulphur cluster scaffold protein
Position: -146 Score: 5.7 Sequence: AACTTAGAATAATTCTGAACT Locus tag: TM1040_2791 Name: katG Funciton: Catalase (EC 1.11.1.6) / Peroxidase (EC 1.11.1.7)
	TM1040_2791	katG	Catalase (EC 1.11.1.6) / Peroxidase (EC 1.11.1.7)

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD