Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulon of Irr in Roseovarius nubinhibens ISM

Properties
Regulator type: Transcription factor
TF locus tag: ISM_00785
Regulator family: FUR
Regulation mode: repressor
Biological process: Iron homeostasis
Effector: Heme
Regulog: Irr - Rhodobacterales
Statistics of regulated genes:
- Genes 16
- Operons 4
Visualization:
Allows to visualize regulon content in the context of metabolic pathways
Built upon 37 sites [see more]
Member of regulog collections
Regulated operons
Locus Tag Name Function
Position: -129
Score: 6.3
Sequence: ACTTTAGAACTGTTCTAAACA
Locus tag: ISM_16015
Name: iscR
Funciton: Iron-sulfur cluster regulator IscR
Locus tag: ISM_16010
Name: sufS
Funciton: Cysteine desulfurase (EC 2.8.1.7)
Locus tag: ISM_16005
Name: sufB
Funciton: Iron-sulfur assembly protein SufB
Locus tag: ISM_16000
Name: null
Funciton: hypothetical protein
Locus tag: ISM_15995
Name: PF02475
Funciton: Methyltransferase FkbM
Locus tag: ISM_15990
Name: null
Funciton: hypothetical protein
Locus tag: ISM_15985
Name: PF02475
Funciton: Protein of unknown function Met10
Locus tag: ISM_15980
Name: PDB:3cvoA
Funciton: hypothetical protein
Locus tag: ISM_15975
Name: sufC
Funciton: Iron-sulfur cluster assembly ATPase protein SufC
Locus tag: ISM_15970
Name: sufD
Funciton: Iron-sulfur cluster assembly protein SufD
Locus tag: ISM_15965
Name: PF04893
Funciton: hypothetical protein
Locus tag: ISM_15960
Name: PF04893
Funciton: hypothetical protein
Locus tag: ISM_15955
Name: sufS2
Funciton: Cysteine desulfurase (EC 2.8.1.7), SufS subfamily
ISM_16015
iscR
Iron-sulfur cluster regulator IscR
ISM_16010
sufS
Cysteine desulfurase (EC 2.8.1.7)
ISM_16005
sufB
Iron-sulfur assembly protein SufB
ISM_16000
hypothetical protein
ISM_15995
PF02475
Methyltransferase FkbM
ISM_15990
hypothetical protein
ISM_15985
PF02475
Protein of unknown function Met10
ISM_15980
PDB:3cvoA
hypothetical protein
ISM_15975
sufC
Iron-sulfur cluster assembly ATPase protein SufC
ISM_15970
sufD
Iron-sulfur cluster assembly protein SufD
ISM_15965
PF04893
hypothetical protein
ISM_15960
PF04893
hypothetical protein
ISM_15955
sufS2
Cysteine desulfurase (EC 2.8.1.7), SufS subfamily
Position: -77
Score: 5.6
Sequence: TTTTTAGAATCGTTCCAAATC
Locus tag: ISM_02850
Name: fssA
Funciton: putative nifU-like iron-sulphur cluster scaffold protein
ISM_02850
fssA
putative nifU-like iron-sulphur cluster scaffold protein
Position: -39
Score: 5.9
Sequence: AGTTTAGAATCATTCTAATTG
Locus tag: ISM_08740
Name: mbfA
Funciton: membrane-bound ferritin
ISM_08740
mbfA
membrane-bound ferritin
Position: -92
Score: 4.6
Sequence: CGCTTAGAACGATTCCAAGGC
Locus tag: ISM_16225
Name: katG
Funciton: Catalase (EC 1.11.1.6) / Peroxidase (EC 1.11.1.7)
ISM_16225
katG
Catalase (EC 1.11.1.6) / Peroxidase (EC 1.11.1.7)
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