Regulon of Irr in Loktanella vestfoldensis SKA53

Properties
Regulator type:	Transcription factor
TF locus tag:	SKA53_01126
Regulator family:	FUR
Regulation mode:	repressor
Biological process:	Iron homeostasis
Effector:	Heme
Regulog:	Irr - Rhodobacterales
Statistics of regulated genes:
- Genes	11
- Operons	4
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 37 sites [see more]

Member of regulog collections

By trascription factor - Irr
By taxonomy - Rhodobacterales
By TF family - FUR
By effector - Heme
By pathway - Iron homeostasis

Regulated operons
	Locus Tag	Name	Function
Position: -111 Score: 5.9 Sequence: ACCTTAGAAGGATTCTAAACT Locus tag: SKA53_05183 Name: iscR Funciton: Iron-sulfur cluster regulator IscR Locus tag: SKA53_05178 Name: sufS Funciton: Cysteine desulfurase (EC 2.8.1.7) Locus tag: SKA53_05173 Name: sufB Funciton: Iron-sulfur assembly protein SufB Locus tag: SKA53_05168 Name: sufC Funciton: Iron-sulfur cluster assembly ATPase protein SufC Locus tag: SKA53_05163 Name: sufD Funciton: Iron-sulfur cluster assembly protein SufD Locus tag: SKA53_05158 Name: PF04893 Funciton: hypothetical protein Locus tag: SKA53_05153 Name: PF04893 Funciton: hypothetical protein Locus tag: SKA53_05148 Name: sufS2 Funciton: Cysteine desulfurase (EC 2.8.1.7), SufS subfamily
	SKA53_05183	iscR	Iron-sulfur cluster regulator IscR
	SKA53_05178	sufS	Cysteine desulfurase (EC 2.8.1.7)
	SKA53_05173	sufB	Iron-sulfur assembly protein SufB
	SKA53_05168	sufC	Iron-sulfur cluster assembly ATPase protein SufC
	SKA53_05163	sufD	Iron-sulfur cluster assembly protein SufD
	SKA53_05158	PF04893	hypothetical protein
	SKA53_05153	PF04893	hypothetical protein
	SKA53_05148	sufS2	Cysteine desulfurase (EC 2.8.1.7), SufS subfamily
Position: -78 Score: 5.9 Sequence: AGTTTAGAATCGTTCCAAATC Locus tag: SKA53_14701 Name: fssA Funciton: putative nifU-like iron-sulphur cluster scaffold protein
	SKA53_14701	fssA	putative nifU-like iron-sulphur cluster scaffold protein
Position: -32 Score: 6.1 Sequence: AGATTAGAATCATTCTAAATA Locus tag: SKA53_14166 Name: mbfA Funciton: membrane-bound ferritin
	SKA53_14166	mbfA	membrane-bound ferritin
Position: -85 Score: 4.9 Sequence: ATGTTAGAAGGATTCTAAGCG Locus tag: SKA53_14466 Name: katG Funciton: Catalase (EC 1.11.1.6) / Peroxidase (EC 1.11.1.7)
	SKA53_14466	katG	Catalase (EC 1.11.1.6) / Peroxidase (EC 1.11.1.7)

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD