Regulon of Irr in Jannaschia sp. CCS1
| Regulator type: | Transcription factor |
| TF locus tag: | Jann_1652 |
| Regulator family: | FUR |
| Regulation mode: | repressor |
| Biological process: | Iron homeostasis |
| Effector: | Heme |
| Regulog: | Irr - Rhodobacterales |
| Statistics of regulated genes: | |
| - Genes | 14 |
| - Operons | 3 |
| Visualization: | |
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Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By trascription factor - Irr
- By taxonomy - Rhodobacterales
- By TF family - FUR
- By effector - Heme
- By pathway - Iron homeostasis
| Locus Tag | Name | Function | |
|---|---|---|---|
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Position: -137
Score: 5.2 Sequence: ACCCTAGAACGATTCCAAATT
Locus tag: Jann_2366
Name: iscR Funciton: Iron-sulfur cluster regulator IscR
Locus tag: Jann_2365
Name: sufS Funciton: Cysteine desulfurase (EC 2.8.1.7)
Locus tag: Jann_2364
Name: sufB Funciton: Iron-sulfur assembly protein SufB
Locus tag: Jann_2363
Name: TIGR01444 Funciton: Methyltransferase FkbM
Locus tag: Jann_2362
Name: PF02475 Funciton: Methyltransferase FkbM
Locus tag: Jann_2361
Name: PF04230 Funciton: ExoV domain protein
Locus tag: Jann_2360
Name: PF02475 Funciton: Methyltransferase FkbM
Locus tag: Jann_2359
Name: sufC Funciton: Iron-sulfur cluster assembly ATPase protein SufC
Locus tag: Jann_2358
Name: sufD Funciton: Iron-sulfur cluster assembly protein SufD
Locus tag: Jann_2357
Name: PF04893 Funciton: hypothetical protein
Locus tag: Jann_2356
Name: PF04893 Funciton: hypothetical protein
Locus tag: Jann_2355
Name: sufS2 Funciton: Cysteine desulfurase (EC 2.8.1.7), SufS subfamily |
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iscR
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Iron-sulfur cluster regulator IscR
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sufS
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Cysteine desulfurase (EC 2.8.1.7)
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sufB
|
Iron-sulfur assembly protein SufB
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TIGR01444
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Methyltransferase FkbM
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PF02475
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Methyltransferase FkbM
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PF04230
|
ExoV domain protein
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PF02475
|
Methyltransferase FkbM
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sufC
|
Iron-sulfur cluster assembly ATPase protein SufC
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sufD
|
Iron-sulfur cluster assembly protein SufD
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PF04893
|
hypothetical protein
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PF04893
|
hypothetical protein
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sufS2
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Cysteine desulfurase (EC 2.8.1.7), SufS subfamily
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Position: -79
Score: 4.9 Sequence: ACTTTAGAACGATTCCAGTTC
Locus tag: Jann_0865
Name: fssA Funciton: putative nifU-like iron-sulphur cluster scaffold protein |
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fssA
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putative nifU-like iron-sulphur cluster scaffold protein
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Position: -123
Score: 6.3 Sequence: AGTTTAGAATTATTCTAGACA
Locus tag: Jann_3276
Name: dps Funciton: Non-specific DNA-binding protein Dps / Iron-binding ferritin-like antioxidant protein / Ferroxidase (EC 1.16.3.1) |
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dps
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Non-specific DNA-binding protein Dps / Iron-binding ferritin-like antioxidant protein / Ferroxidase (EC 1.16.3.1)
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |