Regulon of RirA in Brucella melitensis 16M
| Regulator type: | Transcription factor |
| TF locus tag: | BMEII0707 |
| Regulator family: | Rrf2 |
| Regulation mode: | repressor |
| Biological process: | Iron homeostasis |
| Effector: | Iron ion, (Fe2+) |
| Regulog: | RirA - Rhizobiales |
| Statistics of regulated genes: | |
| - Genes | 16 |
| - Operons | 8 |
| Visualization: | |
|
Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Rhizobiales
- By TF family - Rrf2
- By effector - Iron ion, (Fe2+)
- By pathway - Iron homeostasis
| Locus Tag | Name | Function | |
|---|---|---|---|
|
Position: -161
Score: 4.1 Sequence: CTTGAATTTTATTGGCAAA
Locus tag: BMEI1043
Name: sufS2 Funciton: Cysteine desulfurase (EC 2.8.1.7)
Locus tag: BMEI1042
Name: sufB Funciton: ABC transporter involved in Fe-S cluster assembly, permease protein
Locus tag: BMEI1041
Name: sufC Funciton: ABC transporter involved in Fe-S cluster assembly, ATP-binding protein
Locus tag: BMEI1040
Name: sufD Funciton: ABC transporter involved in Fe-S cluster assembly, permease protein
Locus tag: BMEI1039
Name: sufS Funciton: Cysteine desulfurase (EC 2.8.1.7), SufS subfamily
Locus tag: BMEI1038
Name: PF01883 Funciton: PaaD-like protein (DUF59) involved in Fe-S cluster assembly |
|||
|
sufS2
|
Cysteine desulfurase (EC 2.8.1.7)
|
||
|
sufB
|
ABC transporter involved in Fe-S cluster assembly, permease protein
|
||
|
sufC
|
ABC transporter involved in Fe-S cluster assembly, ATP-binding protein
|
||
|
sufD
|
ABC transporter involved in Fe-S cluster assembly, permease protein
|
||
|
sufS
|
Cysteine desulfurase (EC 2.8.1.7), SufS subfamily
|
||
|
PF01883
|
PaaD-like protein (DUF59) involved in Fe-S cluster assembly
|
||
|
Position: -164
Score: 4.5 Sequence: CATGACTTGAAGTATCATA
Locus tag: BMEI0365
Name: exbB Funciton: Ferric siderophore transport system, proton channel protein ExbB
Locus tag: BMEI0364
Name: exbD Funciton: Ferric siderophore transport system, proton channel protein ExbD |
|||
|
exbB
|
Ferric siderophore transport system, proton channel protein ExbB
|
||
|
exbD
|
Ferric siderophore transport system, proton channel protein ExbD
|
||
|
Position: -52
Score: 4.2 Sequence: CCTGATCCATATACTCATG
Locus tag: BMEII0584
Name: fbpA Funciton: Ferric iron ABC transporter, periplasmic protein
Locus tag: BMEII0585
Name: fbpB Funciton: Ferric iron ABC transporter, permease protein |
|||
|
fbpA
|
Ferric iron ABC transporter, periplasmic protein
|
||
|
fbpB
|
Ferric iron ABC transporter, permease protein
|
||
|
Position: -345
Score: 4.1 Sequence: CATGgaTATTtaAcTCATa
Locus tag: BMEII0705
Name: bfd Funciton: Bacterioferritin ferredoxin
Locus tag: BMEII0704
Name: bfr Funciton: bacterioferritin (Cytochrome B-1) (Cytochrome B-557) |
|||
|
bfd
|
Bacterioferritin ferredoxin
|
||
|
bfr
|
bacterioferritin (Cytochrome B-1) (Cytochrome B-557)
|
||
|
Position: -183
Score: 3.6 Sequence: GGTGAGAAAAGGTTTCATA
Locus tag: BMEII0707
Name: rirA Funciton: Iron-responsive transcriptional repressor, Rrf2 family |
|||
|
rirA
|
Iron-responsive transcriptional repressor, Rrf2 family
|
||
|
Position: -261
Score: 4.9 Sequence: TATGAATGTATTAGTCATC
Locus tag: BMEII0105
Name: frpB Funciton: Iron-regulated outer membrane receptor FrpB |
|||
|
frpB
|
Iron-regulated outer membrane receptor FrpB
|
||
|
Position: -133
Score: 5.1 Sequence: CATGATTAACATAATCATG
Locus tag: BMEI0542
Name: BMEI0542 Funciton: OMPA-like superfamily |
|||
|
BMEI0542
|
OMPA-like superfamily
|
||
|
Position: -124
Score: 4.5 Sequence: CTTGACATTTATATTCACA
Locus tag: BMEII1051
Name: fumC Funciton: Fumarate hydratase class II (EC 4.2.1.2) |
|||
|
fumC
|
Fumarate hydratase class II (EC 4.2.1.2)
|
||
|
Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
|
Regulatory Sites | [ FASTA format ] | DOWNLOAD |