Regulon of RirA in Mesorhizobium sp. BNC1
| Regulator type: | Transcription factor |
| TF locus tag: | Meso_1445 |
| Regulator family: | Rrf2 |
| Regulation mode: | repressor |
| Biological process: | Iron homeostasis |
| Effector: | Iron ion, (Fe2+) |
| Regulog: | RirA - Rhizobiales |
| Statistics of regulated genes: | |
| - Genes | 19 |
| - Operons | 5 |
| Visualization: | |
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Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Rhizobiales
- By TF family - Rrf2
- By effector - Iron ion, (Fe2+)
- By pathway - Iron homeostasis
| Locus Tag | Name | Function | |
|---|---|---|---|
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Position: -129
Score: 3.8 Sequence: GTTGAGTAAATCTATCCGG
Position: -91
Score: 5 Sequence: GTTGATTATTGATGTCAAG
Locus tag: Meso_1441
Name: hmuP Funciton: Hemin ABC transporter, hemin uptake protein
Locus tag: Meso_1442
Name: hmuT Funciton: Hemin ABC transporter, periplasmic protein
Locus tag: Meso_1443
Name: hmuU Funciton: Hemin ABC transporter, permease protein
Locus tag: Meso_1444
Name: hmuV Funciton: Hemin ABC transporter, ATPase protein |
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hmuP
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Hemin ABC transporter, hemin uptake protein
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hmuT
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Hemin ABC transporter, periplasmic protein
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hmuU
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Hemin ABC transporter, permease protein
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hmuV
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Hemin ABC transporter, ATPase protein
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Position: -144
Score: 5 Sequence: CTTGACATCAATAATCAAC
Locus tag: Meso_1440
Name: hmuR Funciton: TonB-dependent iron siderophore receptor protein
Locus tag: Meso_1439
Name: null Funciton: hypothetical protein
Locus tag: Meso_1438
Name: exbB Funciton: Ferric siderophore transport system, proton channel
Locus tag: Meso_1437
Name: exbD Funciton: Biopolymer transport protein ExbD/TolR
Locus tag: Meso_1436
Name: exbD1 Funciton: Biopolymer transport protein ExbD/TolR
Locus tag: Meso_1435
Name: tonB Funciton: Ferric siderophore transport system energy transducer
Locus tag: Meso_1434
Name: null Funciton: hypothetical protein
Locus tag: Meso_1433
Name: PF03992 Funciton: Hypothetical monooxygenase |
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hmuR
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TonB-dependent iron siderophore receptor protein
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hypothetical protein
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exbB
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Ferric siderophore transport system, proton channel
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exbD
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Biopolymer transport protein ExbD/TolR
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exbD1
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Biopolymer transport protein ExbD/TolR
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tonB
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Ferric siderophore transport system energy transducer
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hypothetical protein
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PF03992
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Hypothetical monooxygenase
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Position: -107
Score: 4.9 Sequence: GTTGACATTGATAATCATG
Locus tag: Meso_0338
Name: fhuA2 Funciton: TonB-dependent siderophore receptor
Locus tag: Meso_0337
Name: rhtX Funciton: MFS family transporter
Locus tag: Meso_0336
Name: mxcD Funciton: Siderophore-interacting protein |
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fhuA2
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TonB-dependent siderophore receptor
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rhtX
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MFS family transporter
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mxcD
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Siderophore-interacting protein
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Position: -155
Score: 4.3 Sequence: CTTGACTACTATAGTTTAG
Locus tag: Meso_0170
Name: fbpA Funciton: Ferric iron ABC transporter, periplasmic protein
Locus tag: Meso_0169
Name: fbpB Funciton: Ferric iron ABC transporter, permease protein |
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fbpA
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Ferric iron ABC transporter, periplasmic protein
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fbpB
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Ferric iron ABC transporter, permease protein
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Position: -232
Score: 4.8 Sequence: CATGACCTTGAAAGTCAAG
Locus tag: Meso_4047
Name: bfd Funciton: Bacterioferritin ferredoxin
Locus tag: Meso_4048
Name: bfr Funciton: bacterioferritin (Cytochrome B-1) (Cytochrome B-557) |
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bfd
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Bacterioferritin ferredoxin
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bfr
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bacterioferritin (Cytochrome B-1) (Cytochrome B-557)
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |