Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulon of RirA in Mesorhizobium sp. BNC1

Properties
Regulator type: Transcription factor
TF locus tag: Meso_1445
Regulator family: Rrf2
Regulation mode: repressor
Biological process: Iron homeostasis
Effector: Iron ion, (Fe2+)
Regulog: RirA - Rhizobiales
Statistics of regulated genes:
- Genes 19
- Operons 5
Visualization:
Allows to visualize regulon content in the context of metabolic pathways
Built upon 129 sites [see more]
Member of regulog collections
Regulated operons
Locus Tag Name Function

Position: -129
Score: 3.8
Sequence: GTTGAGTAAATCTATCCGG
Position: -91
Score: 5
Sequence: GTTGATTATTGATGTCAAG
Locus tag: Meso_1441
Name: hmuP
Funciton: Hemin ABC transporter, hemin uptake protein
Locus tag: Meso_1442
Name: hmuT
Funciton: Hemin ABC transporter, periplasmic protein
Locus tag: Meso_1443
Name: hmuU
Funciton: Hemin ABC transporter, permease protein
Locus tag: Meso_1444
Name: hmuV
Funciton: Hemin ABC transporter, ATPase protein
hmuP
Hemin ABC transporter, hemin uptake protein
hmuT
Hemin ABC transporter, periplasmic protein
hmuU
Hemin ABC transporter, permease protein
hmuV
Hemin ABC transporter, ATPase protein

Position: -144
Score: 5
Sequence: CTTGACATCAATAATCAAC
Locus tag: Meso_1440
Name: hmuR
Funciton: TonB-dependent iron siderophore receptor protein
Locus tag: Meso_1439
Name: null
Funciton: hypothetical protein
Locus tag: Meso_1438
Name: exbB
Funciton: Ferric siderophore transport system, proton channel
Locus tag: Meso_1437
Name: exbD
Funciton: Biopolymer transport protein ExbD/TolR
Locus tag: Meso_1436
Name: exbD1
Funciton: Biopolymer transport protein ExbD/TolR
Locus tag: Meso_1435
Name: tonB
Funciton: Ferric siderophore transport system energy transducer
Locus tag: Meso_1434
Name: null
Funciton: hypothetical protein
Locus tag: Meso_1433
Name: PF03992
Funciton: Hypothetical monooxygenase
hmuR
TonB-dependent iron siderophore receptor protein
hypothetical protein
exbB
Ferric siderophore transport system, proton channel
exbD
Biopolymer transport protein ExbD/TolR
exbD1
Biopolymer transport protein ExbD/TolR
tonB
Ferric siderophore transport system energy transducer
hypothetical protein
PF03992
Hypothetical monooxygenase

Position: -107
Score: 4.9
Sequence: GTTGACATTGATAATCATG
Locus tag: Meso_0338
Name: fhuA2
Funciton: TonB-dependent siderophore receptor
Locus tag: Meso_0337
Name: rhtX
Funciton: MFS family transporter
Locus tag: Meso_0336
Name: mxcD
Funciton: Siderophore-interacting protein
fhuA2
TonB-dependent siderophore receptor
rhtX
MFS family transporter
mxcD
Siderophore-interacting protein

Position: -155
Score: 4.3
Sequence: CTTGACTACTATAGTTTAG
Locus tag: Meso_0170
Name: fbpA
Funciton: Ferric iron ABC transporter, periplasmic protein
Locus tag: Meso_0169
Name: fbpB
Funciton: Ferric iron ABC transporter, permease protein
fbpA
Ferric iron ABC transporter, periplasmic protein
fbpB
Ferric iron ABC transporter, permease protein

Position: -232
Score: 4.8
Sequence: CATGACCTTGAAAGTCAAG
Locus tag: Meso_4047
Name: bfd
Funciton: Bacterioferritin ferredoxin
Locus tag: Meso_4048
Name: bfr
Funciton: bacterioferritin (Cytochrome B-1) (Cytochrome B-557)
bfd
Bacterioferritin ferredoxin
bfr
bacterioferritin (Cytochrome B-1) (Cytochrome B-557)
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