Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulon of IscR in Thiobacillus denitrificans

Properties
Regulator type: Transcription factor
TF locus tag: Tbd_1163
Regulator family: Rrf2
Regulation mode: activator (repressor)
Biological process: Iron-sulfur cluster biogenesis
Effector: Iron-sulfur cluster redox state
Regulog: IscR - Various betaproteobacteria
Statistics of regulated genes:
- Genes 10
- Operons 3
Visualization:
Allows to visualize regulon content in the context of metabolic pathways
Built upon 27 sites [see more]
Member of regulog collections
Regulated operons
Locus Tag Name Function

Position: -39
Score: 6.5
Sequence: ATAGTTGACTAAAATACTCGGAAAT
Locus tag: Tbd_1162
Name: cysE
Funciton: Serine acetyltransferase (EC 2.3.1.30)
cysE
Serine acetyltransferase (EC 2.3.1.30)

Position: -88
Score: 6.2
Sequence: ATAGTTGACTAAATTGCTAAGGTAA
Position: -60
Score: 6.5
Sequence: ATAGTTGACTGAAATGCTCGGGAAT
Locus tag: Tbd_1163
Name: iscR
Funciton: Iron-sulfur cluster regulator IscR
Locus tag: Tbd_1164
Name: iscS2
Funciton: Cysteine desulfurase (EC 2.8.1.7), IscS subfamily
Locus tag: Tbd_1165
Name: iscU
Funciton: Iron-sulfur cluster assembly scaffold protein IscU
Locus tag: Tbd_1166
Name: iscA
Funciton: Iron binding protein IscA for iron-sulfur cluster assembly
Locus tag: Tbd_1167
Name: hscB
Funciton: Chaperone protein HscB
Locus tag: Tbd_1168
Name: hscA
Funciton: Chaperone protein HscA
Locus tag: Tbd_1169
Name: fdx
Funciton: ferredoxin, 2Fe-2S type, ISC system
Locus tag: Tbd_1170
Name: yfhJ
Funciton: putative Fe-S cluster assembly protein
iscR
Iron-sulfur cluster regulator IscR
iscS2
Cysteine desulfurase (EC 2.8.1.7), IscS subfamily
iscU
Iron-sulfur cluster assembly scaffold protein IscU
iscA
Iron binding protein IscA for iron-sulfur cluster assembly
hscB
Chaperone protein HscB
hscA
Chaperone protein HscA
fdx
ferredoxin, 2Fe-2S type, ISC system
yfhJ
putative Fe-S cluster assembly protein

Position: -38
Score: 5.1
Sequence: ATTCCCGAGTATTCCACTCAGGTAT
Locus tag: Tbd_2499
Name: ydhD
Funciton: Probable monothiol glutaredoxin ydhD
ydhD
Probable monothiol glutaredoxin ydhD
Export
Regulated Genes [ Tab delimited format ] DOWNLOAD
Regulatory Sites [ FASTA format ] DOWNLOAD