Regulon of IscR in Alteromonadales bacterium TW-7

Properties
Regulator type:	Transcription factor
TF locus tag:	ATW7_18135
Regulator family:	Rrf2
Regulation mode:	activator (repressor)
Biological process:	Iron-sulfur cluster biogenesis
Effector:	Iron-sulfur cluster redox state
Regulog:	IscR - Alteromonadales
Statistics of regulated genes:
- Genes	11
- Operons	4
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 43 sites [see more]

Member of regulog collections

By taxonomy - Alteromonadales
By trascription factor - IscR
By TF family - Rrf2
By effector - Iron-sulfur cluster redox state
By pathway - Iron-sulfur cluster biogenesis

Regulated operons
	Locus Tag	Name	Function
Position: -162 Score: 5.7 Sequence: ATTGTTGAGTATTTTACTCAAGTTT Locus tag: ATW7_06868 Name: ydhD Funciton: Probable monothiol glutaredoxin ydhD
	ATW7_06868	ydhD	Probable monothiol glutaredoxin ydhD
Position: -62 Score: 6.9 Sequence: ATACTTGATTAAAACACTCGGGTAT Locus tag: ATW7_10453 Name: erpA Funciton: ErpA, essential respiratory protein A / probable iron binding protein from the HesB_IscA_SufA family
	ATW7_10453	erpA	ErpA, essential respiratory protein A / probable iron binding protein from the HesB_IscA_SufA family
Position: -37 Score: 6.2 Sequence: GTATCCGAGTAATTTAGTCAGGTAT Locus tag: ATW7_17107 Name: nfuA Funciton: NfuA Fe-S protein maturation Locus tag: ATW7_17102 Name: CPS_0221 Funciton: Conserved hypothetical protein
	ATW7_17107	nfuA	NfuA Fe-S protein maturation
	ATW7_17102	CPS_0221	Conserved hypothetical protein
Position: -187 Score: 7.3 Sequence: ATACTTGACTAAATTACTCAGGTAA Position: -148 Score: 6 Sequence: ATACTTGACCAAACAGGTCAGGTAT Position: -57 Score: 7 Sequence: ATACTTGACTAATTTACTCTGGTAA Locus tag: ATW7_18135 Name: iscR Funciton: Iron-sulfur cluster regulator IscR Locus tag: ATW7_18140 Name: iscS Funciton: Cysteine desulfurase (EC 2.8.1.7), IscS subfamily Locus tag: ATW7_18145 Name: iscU Funciton: Iron-sulfur cluster assembly scaffold protein IscU Locus tag: ATW7_18150 Name: iscA Funciton: Iron binding protein IscA for iron-sulfur cluster assembly Locus tag: ATW7_18155 Name: hscB Funciton: Chaperone protein HscB Locus tag: ATW7_18160 Name: hscA Funciton: Chaperone protein HscA Locus tag: ATW7_18165 Name: fdx Funciton: ferredoxin, 2Fe-2S type, ISC system
	ATW7_18135	iscR	Iron-sulfur cluster regulator IscR
	ATW7_18140	iscS	Cysteine desulfurase (EC 2.8.1.7), IscS subfamily
	ATW7_18145	iscU	Iron-sulfur cluster assembly scaffold protein IscU
	ATW7_18150	iscA	Iron binding protein IscA for iron-sulfur cluster assembly
	ATW7_18155	hscB	Chaperone protein HscB
	ATW7_18160	hscA	Chaperone protein HscA
	ATW7_18165	fdx	ferredoxin, 2Fe-2S type, ISC system

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD