Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulon of IscR in Alteromonadales bacterium TW-7

Properties
Regulator type: Transcription factor
TF locus tag: ATW7_18135
Regulator family: Rrf2
Regulation mode: activator (repressor)
Biological process: Iron-sulfur cluster biogenesis
Effector: Iron-sulfur cluster redox state
Regulog: IscR - Alteromonadales
Statistics of regulated genes:
- Genes 11
- Operons 4
Visualization:
Allows to visualize regulon content in the context of metabolic pathways
Built upon 43 sites [see more]
Member of regulog collections
Regulated operons
Locus Tag Name Function

Position: -162
Score: 5.7
Sequence: ATTGTTGAGTATTTTACTCAAGTTT
Locus tag: ATW7_06868
Name: ydhD
Funciton: Probable monothiol glutaredoxin ydhD
ydhD
Probable monothiol glutaredoxin ydhD

Position: -62
Score: 6.9
Sequence: ATACTTGATTAAAACACTCGGGTAT
Locus tag: ATW7_10453
Name: erpA
Funciton: ErpA, essential respiratory protein A / probable iron binding protein from the HesB_IscA_SufA family
erpA
ErpA, essential respiratory protein A / probable iron binding protein from the HesB_IscA_SufA family

Position: -37
Score: 6.2
Sequence: GTATCCGAGTAATTTAGTCAGGTAT
Locus tag: ATW7_17107
Name: nfuA
Funciton: NfuA Fe-S protein maturation
Locus tag: ATW7_17102
Name: CPS_0221
Funciton: Conserved hypothetical protein
nfuA
NfuA Fe-S protein maturation
CPS_0221
Conserved hypothetical protein

Position: -187
Score: 7.3
Sequence: ATACTTGACTAAATTACTCAGGTAA
Position: -148
Score: 6
Sequence: ATACTTGACCAAACAGGTCAGGTAT
Position: -57
Score: 7
Sequence: ATACTTGACTAATTTACTCTGGTAA
Locus tag: ATW7_18135
Name: iscR
Funciton: Iron-sulfur cluster regulator IscR
Locus tag: ATW7_18140
Name: iscS
Funciton: Cysteine desulfurase (EC 2.8.1.7), IscS subfamily
Locus tag: ATW7_18145
Name: iscU
Funciton: Iron-sulfur cluster assembly scaffold protein IscU
Locus tag: ATW7_18150
Name: iscA
Funciton: Iron binding protein IscA for iron-sulfur cluster assembly
Locus tag: ATW7_18155
Name: hscB
Funciton: Chaperone protein HscB
Locus tag: ATW7_18160
Name: hscA
Funciton: Chaperone protein HscA
Locus tag: ATW7_18165
Name: fdx
Funciton: ferredoxin, 2Fe-2S type, ISC system
iscR
Iron-sulfur cluster regulator IscR
iscS
Cysteine desulfurase (EC 2.8.1.7), IscS subfamily
iscU
Iron-sulfur cluster assembly scaffold protein IscU
iscA
Iron binding protein IscA for iron-sulfur cluster assembly
hscB
Chaperone protein HscB
hscA
Chaperone protein HscA
fdx
ferredoxin, 2Fe-2S type, ISC system
Export
Regulated Genes [ Tab delimited format ] DOWNLOAD
Regulatory Sites [ FASTA format ] DOWNLOAD