Regulon of IscR in Alteromonas macleodii 'Deep ecotype'

Properties
Regulator type:	Transcription factor
TF locus tag:	MADE_01355
Regulator family:	Rrf2
Regulation mode:	activator (repressor)
Biological process:	Iron-sulfur cluster biogenesis
Effector:	Iron-sulfur cluster redox state
Regulog:	IscR - Alteromonadales
Statistics of regulated genes:
- Genes	10
- Operons	3
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 43 sites [see more]

Member of regulog collections

By taxonomy - Alteromonadales
By trascription factor - IscR
By TF family - Rrf2
By effector - Iron-sulfur cluster redox state
By pathway - Iron-sulfur cluster biogenesis

Regulated operons
	Locus Tag	Name	Function
Position: -88 Score: 6.1 Sequence: ATACTTGACTAATTTACTGGGTTTT Position: -63 Score: 6.9 Sequence: ATACTTGACCATTTTAGTCAGGTAT Locus tag: MADE_01355 Name: iscR Funciton: Iron-sulfur cluster regulator IscR Locus tag: MADE_01356 Name: iscS Funciton: Cysteine desulfurase (EC 2.8.1.7), IscS subfamily
	MADE_01355	iscR	Iron-sulfur cluster regulator IscR
	MADE_01356	iscS	Cysteine desulfurase (EC 2.8.1.7), IscS subfamily
Position: -227 Score: 6.6 Sequence: ATATTTGAGTGAAATAGTCGGGTAT Locus tag: MADE_01357 Name: sufB Funciton: Iron-sulfur cluster assembly protein SufB Locus tag: MADE_01358 Name: sufC Funciton: Iron-sulfur cluster assembly ATPase protein SufC Locus tag: MADE_01359 Name: sufD Funciton: Iron-sulfur cluster assembly protein SufD Locus tag: MADE_01360 Name: sufS Funciton: Cysteine desulfurase (EC 2.8.1.7), SufS subfamily Locus tag: MADE_01361 Name: sufA Funciton: Iron binding protein SufA for iron-sulfur cluster assembly Locus tag: MADE_01362 Name: sufT Funciton: Iron sulfur cluster assembly protein SufT Locus tag: MADE_01363 Name: sufE Funciton: Sulfur acceptor protein SufE for iron-sulfur cluster assembly
	MADE_01357	sufB	Iron-sulfur cluster assembly protein SufB
	MADE_01358	sufC	Iron-sulfur cluster assembly ATPase protein SufC
	MADE_01359	sufD	Iron-sulfur cluster assembly protein SufD
	MADE_01360	sufS	Cysteine desulfurase (EC 2.8.1.7), SufS subfamily
	MADE_01361	sufA	Iron binding protein SufA for iron-sulfur cluster assembly
	MADE_01362	sufT	Iron sulfur cluster assembly protein SufT
	MADE_01363	sufE	Sulfur acceptor protein SufE for iron-sulfur cluster assembly
Position: -69 Score: 6.5 Sequence: ATACCTGACTGTTTTAGTCAGGTAA Locus tag: MADE_03996 Name: nfuA Funciton: NfuA Fe-S protein maturation
	MADE_03996	nfuA	NfuA Fe-S protein maturation

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD