Regulon of HypR in Hahella chejuensis KCTC 2396

Properties
Regulator type:	Transcription factor
TF locus tag:	HCH_03168
Regulator family:	GntR/Others
Regulation mode:	activator (repressor)
Biological process:	Proline and 4-hydrohyproline utilization
Effector:	Proline; 4-hydroxyproline
Regulog:	HypR - Oceanospirillales/Alteromonadales
Statistics of regulated genes:
- Genes	5
- Operons	3
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 6 sites [see more]

Member of regulog collections

By taxonomy - Oceanospirillales/Alteromonadales
By trascription factor - HypR
By TF family - GntR/Others
By effector - Proline
By effector - 4-hydroxyproline
By pathway - Proline and 4-hydrohyproline utilization

Regulated operons
	Locus Tag	Name	Function
Position: -42 Score: 4.9 Sequence: ATTTTATACAAT Locus tag: HCH_03166 Name: hypO Funciton: D-amino acid dehydrogenase (EC 1.4.99.1) family protein in hydroxy-L-proline catabolic cluster
	HCH_03166	hypO	D-amino acid dehydrogenase (EC 1.4.99.1) family protein in hydroxy-L-proline catabolic cluster
Position: -129 Score: 4.9 Sequence: ATTGTATAAAAT Locus tag: HCH_03167 Name: hypE Funciton: Proline racemase /4-hydroxyproline epimerase (EC 5.1.1.8) Locus tag: HCH_03168 Name: hypR Funciton: Predicted regulator for proline and hydrohyproline utilization, GntR family
	HCH_03167	hypE	Proline racemase /4-hydroxyproline epimerase (EC 5.1.1.8)
	HCH_03168	hypR	Predicted regulator for proline and hydrohyproline utilization, GntR family
Position: -118 Score: 5.3 Sequence: ATTGTATACAAT Locus tag: HCH_03163 Name: hypD-related, COG329 (DapA) Funciton: 1-pyrroline-4-hydroxy-2-carboxylate deaminase (EC 3.5.4.22) Locus tag: HCH_03162 Name: hypH-related, COG1012 (PutA) Funciton: Aldehyde dehydrogenase (EC 1.2.1.3), possibly ketoglutarate semialdehyde dehydrogenase
	HCH_03163	hypD-related, COG329 (DapA)	1-pyrroline-4-hydroxy-2-carboxylate deaminase (EC 3.5.4.22)
	HCH_03162	hypH-related, COG1012 (PutA)	Aldehyde dehydrogenase (EC 1.2.1.3), possibly ketoglutarate semialdehyde dehydrogenase

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD