Regulon of HutC in Silicibacter TM1040
| Regulator type: | Transcription factor |
| TF locus tag: | TM1040_3001, TM1040_3642 |
| Regulator family: | GntR/Others |
| Regulation mode: | repressor |
| Biological process: | Histidine utilization |
| Effector: | cis-Urocanic acid |
| Regulog: | HutC - Rhodobacterales |
| Statistics of regulated genes: | |
| - Genes | 6 |
| - Operons | 3 |
| Visualization: | |
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Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Rhodobacterales
- By trascription factor - HutC
- By TF family - GntR/Others
- By effector - cis-Urocanic acid
- By pathway - Histidine utilization
| Locus Tag | Name | Function | |
|---|---|---|---|
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Position: -67
Score: 5.2 Sequence: CTTATGTATAGACATAAC
Locus tag: TM1040_3004
Name: hutI Funciton: Imidazolonepropionase (EC 3.5.2.7)
Locus tag: TM1040_3005
Name: hutH Funciton: Histidine ammonia-lyase (EC 4.3.1.3)
Locus tag: TM1040_3006
Name: hutG Funciton: N-formylglutamate deformylase (EC 3.5.1.68)
Locus tag: TM1040_3007
Name: hutU Funciton: Urocanate hydratase (EC 4.2.1.49) |
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hutI
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Imidazolonepropionase (EC 3.5.2.7)
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hutH
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Histidine ammonia-lyase (EC 4.3.1.3)
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hutG
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N-formylglutamate deformylase (EC 3.5.1.68)
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hutU
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Urocanate hydratase (EC 4.2.1.49)
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Position: -119
Score: 5.3 Sequence: AATATGTAGGTACATATT
Locus tag: TM1040_3642
Name: hutC Funciton: Histidine utilization repressor, GntR family |
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hutC
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Histidine utilization repressor, GntR family
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Position: -26
Score: 5.2 Sequence: GTTATGTCTATACATAAG
Locus tag: TM1040_3003
Name: hutF Funciton: Formiminoglutamic iminohydrolase (EC 3.5.3.13) |
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hutF
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Formiminoglutamic iminohydrolase (EC 3.5.3.13)
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |