Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulon of HutC in Paracoccus denitrificans PD1222

Properties
Regulator type: Transcription factor
TF locus tag: Pden_4940, Pden_0708
Regulator family: GntR/Others
Regulation mode: repressor
Biological process: Histidine utilization
Effector: cis-Urocanic acid
Regulog: HutC - Rhodobacterales
Statistics of regulated genes:
- Genes 12
- Operons 2
Visualization:
Allows to visualize regulon content in the context of metabolic pathways
Built upon 29 sites [see more]
Member of regulog collections
Regulated operons
Locus Tag Name Function

Position: -73
Score: 4.4
Sequence: AATAAGTTTAGACATAGA
Position: -50
Score: 4.4
Sequence: AATAAGTTTAGACATAGA
Locus tag: Pden_0710
Name: hutI
Funciton: Imidazolonepropionase (EC 3.5.2.7)
Locus tag: Pden_0711
Name: hutH
Funciton: Histidine ammonia-lyase (EC 4.3.1.3)
Locus tag: Pden_0712
Name: hutG
Funciton: N-formylglutamate deformylase (EC 3.5.1.68)
Locus tag: Pden_0713
Name: COG1804 (CaiB)
Funciton: CAIB/BAIF family protein
Locus tag: Pden_0714
Name: COG1960 (CaiA)
Funciton: Acyl-CoA dehydrogenase, short-chain specific (EC 1.3.99.2)
Locus tag: Pden_0715
Name: hutU
Funciton: Urocanate hydratase (EC 4.2.1.49)
Locus tag: Pden_0716
Name: COG834 (HisJ)
Funciton: ABC amino acid transporter, periplasmic binding protein
Locus tag: Pden_0717
Name: COG765 (HisM)
Funciton: ABC amino acid transporter, permease component
Locus tag: Pden_0718
Name: COG4160 (ArtM)
Funciton: ABC amino acid transporter, permease component
Locus tag: Pden_0719
Name: COG1126 (GlnQ)
Funciton: ABC amino acid transporter, ATPase component
hutI
Imidazolonepropionase (EC 3.5.2.7)
hutH
Histidine ammonia-lyase (EC 4.3.1.3)
hutG
N-formylglutamate deformylase (EC 3.5.1.68)
COG1804 (CaiB)
CAIB/BAIF family protein
COG1960 (CaiA)
Acyl-CoA dehydrogenase, short-chain specific (EC 1.3.99.2)
hutU
Urocanate hydratase (EC 4.2.1.49)
COG834 (HisJ)
ABC amino acid transporter, periplasmic binding protein
COG765 (HisM)
ABC amino acid transporter, permease component
COG4160 (ArtM)
ABC amino acid transporter, permease component
COG1126 (GlnQ)
ABC amino acid transporter, ATPase component

Position: -64
Score: 4.4
Sequence: TCTATGTCTAAACTTATT
Position: -41
Score: 4.4
Sequence: TCTATGTCTAAACTTATT
Locus tag: Pden_0709
Name: hutF
Funciton: Formiminoglutamic iminohydrolase (EC 3.5.3.13)
Locus tag: Pden_0708
Name: hutC
Funciton: Histidine utilization repressor, GntR family
hutF
Formiminoglutamic iminohydrolase (EC 3.5.3.13)
hutC
Histidine utilization repressor, GntR family
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Regulated Genes [ Tab delimited format ] DOWNLOAD
Regulatory Sites [ FASTA format ] DOWNLOAD