Regulon of HutC in Paracoccus denitrificans PD1222
| Regulator type: | Transcription factor |
| TF locus tag: | Pden_4940, Pden_0708 |
| Regulator family: | GntR/Others |
| Regulation mode: | repressor |
| Biological process: | Histidine utilization |
| Effector: | cis-Urocanic acid |
| Regulog: | HutC - Rhodobacterales |
| Statistics of regulated genes: | |
| - Genes | 12 |
| - Operons | 2 |
| Visualization: | |
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Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Rhodobacterales
- By trascription factor - HutC
- By TF family - GntR/Others
- By effector - cis-Urocanic acid
- By pathway - Histidine utilization
| Locus Tag | Name | Function | |
|---|---|---|---|
|
Position: -73
Score: 4.4 Sequence: AATAAGTTTAGACATAGA
Position: -50
Score: 4.4 Sequence: AATAAGTTTAGACATAGA
Locus tag: Pden_0710
Name: hutI Funciton: Imidazolonepropionase (EC 3.5.2.7)
Locus tag: Pden_0711
Name: hutH Funciton: Histidine ammonia-lyase (EC 4.3.1.3)
Locus tag: Pden_0712
Name: hutG Funciton: N-formylglutamate deformylase (EC 3.5.1.68)
Locus tag: Pden_0713
Name: COG1804 (CaiB) Funciton: CAIB/BAIF family protein
Locus tag: Pden_0714
Name: COG1960 (CaiA) Funciton: Acyl-CoA dehydrogenase, short-chain specific (EC 1.3.99.2)
Locus tag: Pden_0715
Name: hutU Funciton: Urocanate hydratase (EC 4.2.1.49)
Locus tag: Pden_0716
Name: COG834 (HisJ) Funciton: ABC amino acid transporter, periplasmic binding protein
Locus tag: Pden_0717
Name: COG765 (HisM) Funciton: ABC amino acid transporter, permease component
Locus tag: Pden_0718
Name: COG4160 (ArtM) Funciton: ABC amino acid transporter, permease component
Locus tag: Pden_0719
Name: COG1126 (GlnQ) Funciton: ABC amino acid transporter, ATPase component |
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hutI
|
Imidazolonepropionase (EC 3.5.2.7)
|
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hutH
|
Histidine ammonia-lyase (EC 4.3.1.3)
|
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hutG
|
N-formylglutamate deformylase (EC 3.5.1.68)
|
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COG1804 (CaiB)
|
CAIB/BAIF family protein
|
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COG1960 (CaiA)
|
Acyl-CoA dehydrogenase, short-chain specific (EC 1.3.99.2)
|
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hutU
|
Urocanate hydratase (EC 4.2.1.49)
|
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COG834 (HisJ)
|
ABC amino acid transporter, periplasmic binding protein
|
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COG765 (HisM)
|
ABC amino acid transporter, permease component
|
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COG4160 (ArtM)
|
ABC amino acid transporter, permease component
|
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COG1126 (GlnQ)
|
ABC amino acid transporter, ATPase component
|
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Position: -64
Score: 4.4 Sequence: TCTATGTCTAAACTTATT
Position: -41
Score: 4.4 Sequence: TCTATGTCTAAACTTATT
Locus tag: Pden_0709
Name: hutF Funciton: Formiminoglutamic iminohydrolase (EC 3.5.3.13)
Locus tag: Pden_0708
Name: hutC Funciton: Histidine utilization repressor, GntR family |
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hutF
|
Formiminoglutamic iminohydrolase (EC 3.5.3.13)
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hutC
|
Histidine utilization repressor, GntR family
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
|
Regulatory Sites | [ FASTA format ] | DOWNLOAD |