Regulon of HutC in Sinorhizobium meliloti 1021
| Regulator type: | Transcription factor |
| TF locus tag: | SMa0402, SMc00674, SMb20048 |
| Regulator family: | GntR/Others |
| Regulation mode: | repressor |
| Biological process: | Histidine utilization |
| Effector: | cis-Urocanic acid |
| Regulog: | HutC - Rhizobiales |
| Statistics of regulated genes: | |
| - Genes | 18 |
| - Operons | 5 |
| Visualization: | |
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Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Rhizobiales
- By trascription factor - HutC
- By TF family - GntR/Others
- By effector - cis-Urocanic acid
- By pathway - Histidine utilization
| Locus Tag | Name | Function | |
|---|---|---|---|
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Position: -36
Score: 4.4 Sequence: TAGTTCCATATACAACCA
Locus tag: SMc00673
Name: hutF Funciton: Formiminoglutamic iminohydrolase (EC 3.5.3.13)
Locus tag: SMc00672
Name: hutX Funciton: Histidine ABC transporter, histidine-binding protein (TC 3.A.1)
Locus tag: SMc00671
Name: hutW Funciton: Histidine ABC transporter, permease protein (TC 3.A.1)
Locus tag: SMc00670
Name: hutV Funciton: Histidine ABC transporter, ATP-binding protein (TC 3.A.1)
Locus tag: SMc00669
Name: hutH2 Funciton: Histidine ammonia-lyase (EC 4.3.1.3)
Locus tag: SMc00668
Name: COG3314 Funciton: Predicted histidine uptake transporter
Locus tag: SMc00667
Name: hutD Funciton: Conserved hypothetical protein related to histidine degradation |
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hutF
|
Formiminoglutamic iminohydrolase (EC 3.5.3.13)
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hutX
|
Histidine ABC transporter, histidine-binding protein (TC 3.A.1)
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hutW
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Histidine ABC transporter, permease protein (TC 3.A.1)
|
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hutV
|
Histidine ABC transporter, ATP-binding protein (TC 3.A.1)
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hutH2
|
Histidine ammonia-lyase (EC 4.3.1.3)
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COG3314
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Predicted histidine uptake transporter
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hutD
|
Conserved hypothetical protein related to histidine degradation
|
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Position: -110
Score: 4.4 Sequence: TGGTTGTATATGGAACTA
Locus tag: SMc00674
Name: hutC Funciton: Histidine utilization repressor, GntR family |
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hutC
|
Histidine utilization repressor, GntR family
|
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Position: -110
Score: 5.4 Sequence: AATATGTATAGACAACTA
Locus tag: SMa0391
Name: COG3842 (PotA) Funciton: ABC transporter, ATPase component
Locus tag: SMa0392
Name: COG687 (PotD) Funciton: ABC transporter, periplasmic binding protein
Locus tag: SMa0394
Name: COG1176 (PotB) Funciton: ABC transporter, permease component
Locus tag: SMa0396
Name: COG1177 (PotC) Funciton: ABC transporter, permease component
Locus tag: SMa0398
Name: hisD Funciton: Histidinol dehydrogenase (EC 1.1.1.23)
Locus tag: SMa0400
Name: COG1063 (Tdh) Funciton: Zn-dependent dehydrogenase
Locus tag: SMa0402
Name: hutC Funciton: Histidine utilization repressor, GntR family
Locus tag: SMa0403
Name: SMa0403 Funciton: hypothetical protein |
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COG3842 (PotA)
|
ABC transporter, ATPase component
|
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COG687 (PotD)
|
ABC transporter, periplasmic binding protein
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COG1176 (PotB)
|
ABC transporter, permease component
|
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COG1177 (PotC)
|
ABC transporter, permease component
|
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hisD
|
Histidinol dehydrogenase (EC 1.1.1.23)
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COG1063 (Tdh)
|
Zn-dependent dehydrogenase
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hutC
|
Histidine utilization repressor, GntR family
|
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SMa0403
|
hypothetical protein
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Position: -77
Score: 4.1 Sequence: ATGATCTGTATATATGTA
Position: -75
Score: 3.9 Sequence: GATCTGTATATATGTATA
Position: -67
Score: 5.6 Sequence: TATATGTATAGACATGTT
Locus tag: SMa0389
Name: COG1028 (FabG) Funciton: Short-chain alcohol dehydrogenase |
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COG1028 (FabG)
|
Short-chain alcohol dehydrogenase
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Position: -81
Score: 5.6 Sequence: AACATGTCTATACATATA
Position: -73
Score: 3.9 Sequence: TATACATATATACAGATC
Position: -71
Score: 4.1 Sequence: TACATATATACAGATCAT
Locus tag: SMa0387
Name: hisC Funciton: Histidinol-phosphate aminotransferase |
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hisC
|
Histidinol-phosphate aminotransferase
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
|
Regulatory Sites | [ FASTA format ] | DOWNLOAD |